Protein

View in Explore
Genbank accession
QPB10011.1 [GenBank]
Protein name
central tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MKTERFEVIDGSKGGGGSSHTPVESPDSLQSLAKARILLALSEGEVQGIDPANLAKQVYLDGTVVENADGSRNFEDVRLEFRSGTNDQEPIAGFNAVENEIGIGVDLKASAPWTRAVTNRNIDAVNIRIGFPQLTTQEDNGDINGGDVHYQIALQTDGGAFNVVADLHATGKTTTLYERTHRIDLPRANTGWQLRVTRLTPDSTSAKVVNPTRIQAFTEIVDAKLRYPLTALLFVEYNAKSFQNVPKASIKMKGRVIRVPNNYDPIARTYSGQWNGQFKWAWSNNPAWIWYDFCLGERFGLGRKIKPEMLDKWELYDIAQRCDQRVPDGRGGTGTEPRFTLDLYVQGRAQAWQLMKDIAAVFAGMTYWGQGMLNMVSDRPAEVENVVTRASVLDGKFTYSSGDKKNRYNAYTVSYSDPLNHYADVVTADSVQELVQRYRGVNALEITALGCTSEREAKARGLWALLSNNYDRMFEFSLGFDGVNFLPGDVIGIMDDKLSRKADGTPAVYGGRMGNVVNNTQMVLDRATDGTVGDTFMVRTLGGKLEKRVIQSVSADRMTVTVSPGLAARPQPNAVWVIDAVGQMTVQLARVVSMAPDEDAATYKIAAISYNASKYDAVDNVTRIDERPISLLPPGVQVPPASVSITGHDQLWQGMTMQTASITWPAADGAQSYDVQWRRNNSDWINVPRTTGTGIDLPGIYAGDYIARVRAVNSVGFSSVWTTSPVVTLTGKTGTPTAPLNFMGEPLIGGVHLKWAFPNGSDDLSHTEIMWRSNSGTDPTEYPLFNVPYPGTGFDNMGLTPAEYRQYKARCVDKLGNVSPWTEWITANSSEDIGDYMDGIIDGFLGSDAGQNLVEKIDISGEAILQTALANHADIQQRLLVDGQNRAQVLQIQTTVSDQSQTMASLEQQVSAQRVILDEHGQEIDNVGAAVNQKMTAVVDHNGNASAQYSLKAGIQWNGGYYDAGMVLGVQMTGPGNTPKTSFGVKADQFVVVNSNTGWADAPFIIDGGATYIKTGYIRDASITNAKIGSYIQSNNYHWDENPDLRTGWSISKNGDAVFANAQVSGGIYAKWGVLDNVTINETCVIKGSLSANNIRGDIYVTRGDGWWLQKWNTGAGAYKRVTLFWVELYPDFERKLTINGICRMMNWGGSGTGSWGKMWAGSTLLIDVPANSSFNANVDASDREFVLPRGNGGVEVYMEIQSGFNDRTDFYIQMGSWVDNNGRLNNWPPSGPQSRTIGGAMKVELTKNAAGPIGDLPHNYWPIDV
Physico‐chemical
properties
protein length:1266 AA
molecular weight: 138588,54350 Da
isoelectric point:5,17913
aromaticity:0,09163
hydropathy:-0,33847

Domains

Domains [InterPro]
IPR053171
Unmapped
1–913
IPR053171 IPR015406
DC_0014
STR
1–1228
DC_0014
IPR055385
ATT
97–223
IPR055385 IPR032876 IPR003961 IPR003961
IPR013783
STR
639–733
IPR013783
IPR003961
STR
639–733
IPR003961
IPR036116
STR
659–732
IPR036116
QPB10011.1
1 1266
Architecture
STR
ATT
STR
ATT
STR
STR 1-96 | ATT 97-223 | STR 224-348 | ATT 349-499 | STR 500-1228 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB10011.1
1 1266
Domain Start End Length (AA) Confidence
N-terminal 1 510 510 0,8686
Central domain 511 1028 519 0,0427
C-terminal 1029 1266 237 0,7859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-510
Central
511-1028
C-terminal
1029-1266

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Smarc2
[NCBI] 		2777232 Viruses >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB10011.1 [NCBI]
Genbank nucleotide accession
MT980831.1 [NCBI]
CDS location
range 16439 -> 20239
strand +
CDS
ATGAAAACAGAACGCTTTGAAGTGATCGACGGTTCAAAGGGAGGGGGCGGCAGCTCCCACACCCCAGTTGAATCCCCGGACAGCCTGCAGTCGTTGGCGAAGGCGCGCATCTTGCTGGCGCTTTCCGAGGGCGAGGTGCAGGGCATCGACCCGGCCAACTTGGCCAAGCAGGTATACCTCGACGGAACCGTGGTGGAGAACGCCGACGGCTCGCGCAACTTTGAGGACGTCAGGCTGGAGTTCCGCTCCGGCACGAACGACCAAGAGCCGATCGCTGGGTTCAATGCCGTGGAAAACGAGATCGGCATCGGCGTAGACTTGAAAGCCTCGGCGCCATGGACGCGCGCAGTCACCAACCGGAATATTGACGCGGTCAATATTCGAATCGGTTTCCCGCAGCTGACAACGCAGGAAGACAACGGCGACATTAACGGCGGCGACGTCCACTATCAGATCGCCCTGCAGACTGACGGCGGCGCATTCAACGTCGTTGCTGACCTTCACGCCACCGGCAAGACGACCACGCTTTACGAGCGCACCCATAGAATTGACTTGCCGAGGGCTAACACCGGGTGGCAGCTACGCGTTACTCGCCTGACGCCTGACAGCACCAGCGCCAAGGTAGTCAACCCAACGCGCATTCAGGCATTCACGGAGATCGTGGACGCTAAGCTGCGCTATCCGCTCACCGCGCTGCTGTTCGTCGAGTACAACGCAAAATCGTTCCAGAACGTGCCAAAGGCATCGATCAAGATGAAAGGCCGGGTTATCCGCGTGCCAAACAACTATGACCCGATCGCCCGCACTTACTCCGGCCAGTGGAATGGTCAATTTAAATGGGCGTGGAGCAATAACCCTGCGTGGATTTGGTACGACTTTTGTCTCGGCGAGCGCTTTGGCCTTGGTCGCAAGATCAAGCCTGAAATGCTCGACAAGTGGGAGCTGTACGACATTGCCCAGCGCTGCGACCAGCGCGTGCCGGACGGTCGAGGGGGAACCGGAACTGAACCACGATTCACCCTTGACCTGTACGTTCAGGGCCGGGCGCAGGCTTGGCAGCTCATGAAGGACATTGCGGCAGTATTCGCCGGGATGACTTATTGGGGTCAGGGCATGCTTAATATGGTGTCAGACCGCCCTGCCGAGGTGGAGAACGTCGTAACGCGAGCCAGCGTGCTGGATGGCAAATTTACCTACAGCTCCGGCGACAAGAAAAACCGCTATAACGCCTACACCGTAAGCTACAGCGACCCGCTGAACCATTACGCCGACGTCGTCACTGCTGACAGCGTTCAGGAGCTGGTGCAACGCTACCGAGGCGTAAACGCACTGGAGATCACCGCGCTGGGCTGTACCAGCGAGCGAGAAGCCAAGGCGCGCGGACTATGGGCGCTGCTGTCGAACAACTATGATCGCATGTTCGAGTTCTCTCTGGGTTTCGACGGTGTAAATTTCCTGCCGGGAGACGTGATCGGCATCATGGACGACAAGCTATCCCGCAAGGCTGACGGCACTCCGGCAGTGTATGGCGGACGCATGGGCAACGTGGTGAACAACACGCAAATGGTGCTCGACCGAGCAACAGACGGAACGGTTGGCGACACGTTCATGGTGCGCACGCTGGGCGGCAAGCTTGAGAAGCGAGTTATCCAGAGCGTTAGCGCTGACCGCATGACGGTAACTGTATCGCCGGGCTTGGCAGCTCGCCCTCAGCCTAATGCTGTATGGGTGATCGACGCCGTTGGCCAGATGACCGTCCAGCTGGCGCGCGTGGTTTCAATGGCGCCCGATGAGGACGCGGCAACGTACAAGATTGCGGCCATCAGCTACAACGCCAGCAAATACGACGCAGTGGATAATGTGACGCGTATCGACGAGCGACCGATCTCCCTGTTGCCTCCCGGCGTGCAGGTTCCTCCGGCTTCAGTGTCAATCACTGGTCACGATCAGCTGTGGCAGGGTATGACCATGCAAACGGCATCGATCACTTGGCCGGCCGCTGATGGGGCGCAAAGCTACGATGTGCAATGGCGCCGGAATAACAGCGACTGGATCAACGTTCCGCGCACCACTGGCACCGGGATTGACTTGCCGGGAATCTATGCCGGTGACTATATCGCCCGCGTGCGCGCGGTCAACTCCGTGGGATTCTCGTCCGTGTGGACTACGTCGCCAGTTGTGACGCTGACAGGCAAGACCGGCACGCCAACGGCGCCGCTTAACTTTATGGGGGAGCCATTGATCGGAGGCGTCCATCTGAAATGGGCATTCCCTAACGGCAGCGATGACCTATCGCACACCGAAATCATGTGGCGCTCAAATAGCGGAACAGACCCGACAGAGTACCCGCTGTTTAACGTGCCTTATCCCGGAACCGGGTTTGACAATATGGGACTGACGCCTGCAGAGTACCGCCAATACAAGGCGCGATGCGTCGACAAGCTTGGCAACGTTTCGCCATGGACTGAATGGATCACTGCCAACTCGTCAGAGGATATTGGCGATTATATGGATGGCATTATTGACGGTTTCCTTGGCTCAGATGCTGGCCAGAACCTCGTCGAAAAGATCGACATTAGCGGCGAGGCAATCCTGCAGACGGCGCTGGCCAACCATGCAGACATTCAGCAGCGCCTGCTGGTTGACGGTCAGAACCGGGCGCAGGTGCTGCAGATTCAGACCACTGTCAGCGACCAGTCGCAGACCATGGCCAGCTTGGAGCAGCAGGTTAGCGCGCAGCGCGTTATTCTGGACGAGCACGGTCAGGAGATCGACAACGTCGGAGCAGCCGTTAATCAGAAGATGACGGCAGTGGTCGACCACAACGGCAATGCGTCGGCGCAATACTCCTTGAAGGCTGGCATTCAGTGGAATGGCGGTTATTACGACGCCGGGATGGTGCTTGGCGTTCAGATGACCGGGCCGGGGAATACGCCAAAAACCTCGTTCGGCGTCAAGGCCGATCAGTTTGTCGTCGTGAACAGTAACACCGGATGGGCTGATGCTCCTTTCATCATCGACGGCGGCGCGACGTACATCAAAACCGGGTACATCCGCGACGCGTCGATCACCAACGCGAAGATTGGGAGCTATATCCAGTCAAATAATTATCACTGGGATGAAAACCCTGATCTGCGTACCGGATGGTCAATCAGCAAGAACGGCGACGCTGTTTTTGCCAATGCTCAGGTCTCGGGCGGCATCTATGCAAAATGGGGCGTTCTGGACAATGTGACCATCAACGAGACATGCGTGATCAAGGGGTCATTGTCGGCCAACAATATCAGGGGTGACATTTACGTTACCCGCGGGGATGGTTGGTGGTTGCAAAAGTGGAATACTGGCGCGGGGGCATATAAACGCGTTACCCTGTTCTGGGTCGAGCTTTACCCAGACTTTGAGCGCAAGCTGACGATCAACGGGATTTGCCGCATGATGAACTGGGGCGGGTCAGGGACTGGTAGCTGGGGAAAGATGTGGGCAGGTAGCACTTTGCTGATCGACGTCCCGGCGAACTCAAGCTTTAACGCCAACGTTGACGCAAGTGATCGTGAGTTCGTTCTTCCTCGCGGCAATGGCGGCGTTGAGGTTTACATGGAAATCCAATCCGGTTTCAACGATAGAACTGACTTCTATATTCAGATGGGGTCATGGGTTGATAATAACGGCAGGCTCAACAACTGGCCGCCTAGCGGCCCGCAATCTCGTACCATTGGCGGCGCCATGAAAGTGGAGCTAACAAAAAACGCAGCCGGGCCGATTGGCGATTTACCGCACAACTACTGGCCTATCGACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d34314e41c7711aff85777eb7eb9fb3f18cb7034f529e3a3de30d4e75802352
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50