Protein

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Genbank accession

YP_009882546.1 [GenBank]

Protein name

tail protein I

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MTANYPASILPPNATAVERAIDRASAAALERLPVYLIRWVKDPDSCPLALLPWLAWEYQVDTWNINWSEQKKRDAIKRAHYIHRHRGTVAAVRHALVDSPFGTDIVEWFNQNPKGDPYTFRLNVYQNDLPVTEYDQQDLKLAVLRARNLRSWFSVHVFGRLHGTSYAAGYMYATEKITPRFVPLQVVLSRYELNLAPGDAETVTVTILPEYAEDKTFTVTTSDQTIATARIVNGDILVTGMKRGTCSVTVTTTNGVSAVISIKVVAVMKFITRIDSATRPIFFAHMDEGFTVDYGDGIDSRDYRFDPASEASGWVIPTRELVQGKEYTITVKNTETACLRSRLSNYSSKLNPVVELISVTGERGHLSGFALDTTGLMAIRPGAFDDLPNVNNCKNIFTNCSSLAGIPASLFSRMKIEDFSDAFRGCTSLTEVPSGLFANQPDAIDFSSVFAGCTGLISIGNNLFHSCVSAVNFSYAFDGCSMLANIGTGIFTGCGSAGTFSYSFRACKNLLVLPADMFADVPGGAFTGVFQNCMALTAIPANLFKTCSEANHFGGAFSGCSQLLSVPAGLFAGLSKVTYFGTVFSGCSSLKTVGAGLFAGCSQAQTFASAFYSCRSLETVAKDIFSGCVEVTTFASTFYGCSSLTALPSFTDCAKVTTFSYAFANCGSLTKIDADAFAVKALVTTFTYAFVNCTSLVSVEDGAFRGCSALTSLGYTFSGCRSLVSLAGDMFAGCAKVTAVDFLFDKCSALVELPKELFSDMVSLKGMGSTFRDCTALISLPSGLLDGCINLTSLTLTFSGCTSLALLPGDLLKNNILLSGAGSTFYGCTSLVNIPPTLFASCSLITSFGATFQNTGVEEIPENLFSGNPLVTSYGQTFRGCKNLRSVPAGLFAASISATVFTNVFSECSALEVVGAGLLNTTAVTTVGYLFDGCASLHSDVNTIFNLASYPEIVTTTAIFRSCVLLAGKGLVFMGKVPNVTAHYYAFYACAGLDDYDDLPGNWITNKL

Physico‐chemical properties

protein length:	1008 AA
molecular weight:	108006,96410 Da
isoelectric point:	5,59326
aromaticity:	0,11012
hydropathy:	0,25962

Domains

Domains [InterPro]

IPR006521
STR
10–150

IPR006521 DC_2289 IPR053139

IPR006521
STR
10–130

IPR006521 IPR003343 IPR032675 IPR032675 IPR032675

G3DSA:2.60.40.1080
STR
184–265

G3DSA:2.60.40.1080 DC_0669 IPR026906 DC_0669

IPR008964
RBD
185–265

IPR008964 SSF52058

IPR003343
STR
189–258

IPR003343 DC_0669 DC_0669

DC_0669
RBD
603–700

DC_0669

YP_009882546.1

1 1008

Architecture

STR

STR 10-150 | STR 174-1007 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR006521	STR	DC_0712	10	150	InterPro cluster	Tail protein I	Central	Low	Positional only	25 proteins / 25 hits
IPR006521	STR	DC_0712	10	130	InterPro cluster	Tail protein I	Central	Low	Positional only	25 proteins / 25 hits
DC_2289	STR	DC_2289	174	375	Novel HMM	DC_2289	Central	Low	Positional only	12 proteins / 12 hits
IPR003343	STR	DC_0008	180	262	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	184	265	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR008964	RBD	IPR008964	185	265	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	189	258	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR032675	STR	IPR032675	286	632	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
IPR053139	Unmapped	-	392	902	InterPro	Putative surface bspA-like protein	-	-	-	-
DC_0669	RBD	DC_0669	415	522	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits
SSF52058	STR	SSF52058	462	834	Merged direct domain	SSF52058	Central	Low	Positional only	12 proteins / 12 hits
DC_0669	RBD	DC_0669	504	622	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits
IPR026906	STR	DC_0450	583	696	InterPro cluster	BspA-type LRR region	Central	High	Text match	24 proteins / 47 hits
DC_0669	RBD	DC_0669	603	700	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits
IPR032675	STR	IPR032675	633	819	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
DC_0669	RBD	DC_0669	746	835	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits
IPR032675	STR	IPR032675	821	1005	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
DC_0669	RBD	DC_0669	823	1007	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_009882546.1

1 1008

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	261	261	0,8378
Central domain	262	997	737	0,9581
C-terminal	998	1008	10	0,1060

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-261

Central
262-997

C-terminal
998-1008

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Klebsiella phage ST16-OXA48phi5.4 [NCBI]	2510483	Uroviricota > Caudoviricetes > Peduoviridae > Reipivirus ST16OXA48phi54 >
Host	Klebsiella pneumoniae [NCBI]	573	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

YP_009882546.1 [NCBI]

Genbank nucleotide accession

NC_049450 [NCBI]

CDS location

range 23679 -> 26705
strand +

CDS

ATGACCGCTAATTATCCCGCCAGCATTCTGCCACCCAACGCCACCGCCGTGGAGCGGGCCATAGACAGGGCCAGCGCCGCCGCACTGGAGAGGTTGCCGGTATATCTGATCCGTTGGGTTAAAGATCCGGACAGTTGCCCGCTGGCGCTGCTGCCGTGGCTGGCGTGGGAATATCAGGTTGATACCTGGAATATTAACTGGTCAGAACAAAAGAAACGCGATGCGATCAAGCGCGCCCACTACATCCACCGCCATCGTGGTACAGTCGCCGCCGTCCGTCATGCCCTGGTGGACAGTCCTTTCGGGACGGATATTGTTGAATGGTTCAATCAGAACCCGAAAGGGGATCCGTATACCTTTCGCCTGAATGTGTATCAGAACGATTTGCCGGTGACGGAATACGACCAGCAGGATCTAAAACTGGCGGTGCTGCGCGCCAGGAATCTGCGCAGCTGGTTTTCCGTTCATGTATTTGGCCGACTTCATGGAACCTCGTATGCGGCCGGTTACATGTACGCCACGGAGAAAATCACGCCGCGCTTTGTCCCGTTGCAGGTGGTTTTATCCCGCTACGAGCTGAATCTGGCCCCCGGGGACGCGGAAACGGTCACGGTGACAATTCTCCCCGAATACGCGGAAGATAAAACCTTTACGGTAACTACATCGGATCAAACAATCGCGACCGCCCGGATAGTAAACGGCGATATTCTGGTTACGGGCATGAAGCGAGGTACCTGTTCGGTCACCGTTACGACGACTAATGGCGTCAGTGCGGTGATCAGCATAAAAGTGGTCGCGGTAATGAAGTTCATTACCCGCATCGACAGTGCAACCAGGCCAATATTCTTTGCTCATATGGACGAGGGTTTCACGGTTGACTATGGCGACGGCATTGACAGCCGGGACTACCGTTTCGATCCCGCCAGTGAAGCTTCAGGTTGGGTTATTCCTACACGTGAATTAGTACAGGGAAAGGAATACACCATCACGGTTAAGAACACGGAAACCGCCTGTCTGCGCAGCCGTTTATCTAACTATTCTTCGAAACTGAACCCTGTTGTGGAATTGATTAGTGTTACAGGGGAAAGAGGTCATCTTTCAGGGTTCGCTTTGGATACCACCGGATTAATGGCTATTCGTCCCGGAGCATTTGACGATTTGCCAAACGTGAATAACTGCAAAAATATTTTTACCAACTGCTCGTCGCTTGCAGGTATTCCGGCATCGTTGTTTTCTCGCATGAAGATAGAGGATTTTTCAGACGCATTCAGAGGGTGTACATCGCTTACTGAGGTTCCATCGGGGCTATTTGCAAACCAGCCTGATGCGATCGACTTCTCATCGGTATTTGCAGGCTGCACCGGCCTGATCAGTATCGGCAATAATCTGTTCCACAGCTGTGTATCTGCGGTGAATTTCAGTTACGCGTTTGATGGTTGCTCAATGCTTGCAAATATCGGCACGGGAATATTTACAGGATGCGGTTCAGCAGGGACATTCTCTTATAGCTTCAGGGCGTGTAAAAATCTTCTTGTCTTGCCTGCTGATATGTTTGCGGATGTTCCGGGCGGCGCATTCACCGGCGTATTCCAGAATTGCATGGCACTGACGGCAATTCCCGCCAACCTGTTTAAAACATGTTCTGAAGCGAATCATTTTGGCGGTGCATTCTCTGGCTGTTCGCAGCTTCTTTCTGTTCCTGCCGGTCTGTTTGCAGGTCTGTCGAAAGTCACCTATTTCGGGACAGTCTTTTCTGGTTGCAGTTCGCTGAAAACGGTCGGCGCGGGTTTATTTGCCGGGTGCAGCCAGGCGCAGACATTCGCCTCTGCATTTTACAGCTGCCGCTCTCTTGAAACTGTAGCGAAAGATATTTTCAGCGGCTGCGTAGAGGTGACGACCTTTGCCAGTACGTTTTATGGGTGCAGCAGCCTGACGGCGCTCCCGTCTTTTACTGACTGCGCGAAAGTCACCACTTTCTCATACGCTTTTGCTAACTGTGGATCGCTCACGAAAATTGATGCAGATGCTTTTGCTGTTAAAGCGCTGGTCACGACATTCACATACGCTTTTGTAAACTGTACTTCGCTGGTTTCTGTGGAGGACGGTGCATTTCGGGGATGTAGCGCGTTAACCAGCTTGGGCTATACGTTTTCAGGTTGCCGCTCTCTGGTTTCTCTCGCGGGAGATATGTTTGCCGGTTGCGCCAAAGTGACAGCCGTCGATTTCTTATTCGACAAGTGCTCCGCGCTGGTTGAACTGCCAAAAGAGCTATTCAGCGACATGGTGTCCTTGAAAGGCATGGGATCGACTTTCCGGGATTGTACTGCACTCATCTCGCTACCATCCGGCCTGCTTGATGGTTGCATCAATCTCACTTCGTTAACGCTGACATTCTCGGGCTGCACCTCACTGGCGTTATTGCCTGGCGATTTGCTGAAAAACAACATTCTTCTGTCCGGCGCCGGATCGACGTTTTACGGTTGCACCTCACTGGTAAATATTCCGCCGACGCTGTTCGCGTCCTGCTCTCTTATTACCTCGTTTGGCGCCACGTTCCAGAATACCGGCGTGGAGGAAATACCGGAAAACCTGTTCAGCGGCAACCCGCTGGTGACCTCTTACGGCCAGACTTTCAGGGGCTGTAAAAACCTGCGCTCAGTGCCAGCCGGTCTTTTTGCCGCCAGCATAAGTGCCACGGTATTCACGAATGTCTTTTCGGAATGCAGTGCGCTGGAAGTCGTCGGGGCGGGATTACTCAACACCACGGCGGTAACGACGGTGGGTTATCTGTTTGACGGCTGCGCGTCATTACACAGCGACGTTAACACGATATTTAATCTTGCGAGTTACCCGGAGATTGTCACCACAACGGCAATATTCAGGAGCTGCGTATTACTCGCCGGCAAAGGCCTGGTATTTATGGGCAAAGTGCCGAACGTCACCGCGCACTATTACGCGTTTTATGCCTGTGCGGGCCTGGACGATTACGACGATTTACCCGGCAACTGGATAACGAACAAACTATGA

Genome Context

Tertiary structure

PDB ID

b1c5743971bea02c4e884d990f6991425b3f896822827d276ac3f38f5fafdbbc

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,4546

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence