Protein

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Genbank accession
YP_009055366.1 [GenBank]
Protein name
membrane protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQGILIDLNDGRPAMEITAGLRVPAVTGSINTIGLSSPASSWDFGLTMTPGSTAFCLPTQAVYVDAYDVIPEVYYMNGFSKVNDGVGRITLSNFNGANGRILQFGGQCFEILPASSQSIPGVLVENSTDFTAISSNSRLMTAAWVGGIQVNGSASLPVGGIPFGKWDNPNVSLESDGSTIWCRDITYNGIDDVAASTYVQLVIFNNTPPVAGPGLTISNSAGQIVFSSVRRPFVLSGFMQINNGYQSVNGGFFPILRCGATTRVTGGYNNLRYKGVCMSGGSVRAVPGTVIGNYSTQTGAQFPFDTNISMALPFIPNFY
Physico‐chemical
properties
protein length:320 AA
molecular weight: 33772,79090 Da
isoelectric point:4,89159
aromaticity:0,10313
hydropathy:0,14625

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
YP_009055366.1
1 320
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009055366.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,1670
Central domain 85 283 200 0,0284
C-terminal 284 320 36 0,9830
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_AHS24
[NCBI] 		1416030 Uroviricota > Caudoviricetes > Drexlerviridae > Rogunavirus > Rogunavirus AHS24
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009055366.1 [NCBI]
Genbank nucleotide accession
NC_024784 [NCBI]
CDS location
range 21021 -> 21983
strand -
CDS
ATGCCTCAAGGTATCTTGATAGATTTGAATGACGGAAGGCCAGCAATGGAAATCACAGCTGGCTTGAGAGTTCCAGCCGTGACTGGTTCAATAAACACTATCGGGTTAAGCTCACCAGCATCATCATGGGATTTCGGTTTGACTATGACTCCTGGCTCAACAGCATTCTGCCTGCCAACTCAGGCTGTTTATGTTGATGCATATGATGTTATACCAGAAGTTTATTACATGAATGGGTTCTCGAAGGTTAACGATGGGGTTGGAAGGATTACATTAAGTAACTTTAACGGCGCTAATGGTCGCATATTGCAGTTTGGCGGTCAGTGCTTTGAGATTTTACCAGCATCATCACAATCAATCCCCGGTGTCCTTGTTGAGAACTCGACTGACTTTACAGCGATATCAAGCAATTCCAGATTAATGACTGCTGCTTGGGTTGGTGGCATTCAGGTTAATGGCTCTGCATCATTGCCAGTTGGCGGCATTCCTTTTGGTAAATGGGATAACCCAAACGTATCCCTTGAAAGTGATGGTAGTACGATATGGTGTAGGGATATAACATACAATGGGATTGATGATGTTGCTGCAAGTACTTACGTTCAGTTAGTTATTTTCAATAATACACCTCCAGTAGCTGGTCCGGGTTTAACGATATCAAACAGCGCTGGGCAGATAGTTTTCTCTAGCGTCAGGAGGCCATTTGTTCTAAGTGGATTTATGCAGATTAATAATGGTTACCAGTCGGTGAATGGTGGGTTCTTCCCAATACTTAGATGCGGAGCGACAACTAGAGTCACTGGTGGATATAATAACTTACGATACAAGGGTGTTTGCATGTCTGGAGGTTCAGTTAGAGCCGTCCCAGGCACTGTTATAGGTAACTATTCAACTCAAACTGGCGCGCAATTCCCATTTGATACAAACATATCAATGGCACTTCCATTTATTCCCAACTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
44dc81a174eabf0c6cef25fa7c08a87db164ba5a3cee53877d44596c3fafa2fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50