Protein

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Genbank accession

XSB41399.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,89

Evidence RBPdetect2

Probability 0,94

Protein sequence

MSVVVSGTLKSPDGQVVSDANITLTALTVSPDALSGTSASAVTTSTGYYGMTMEPGEYAVSVTVRGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATESAQKASEAAEAATRAGESEKAAAADAKEARRHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGDAGPRGETGPAGPRGEKGEQGERGPQGIPGQKGDTGERGPQGVQGPAGPRGATGPQGAMGPRGETGARGEKGDPGGPQGPKGDTGPRGEPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGETGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPQGPAGGRGPMGPPGLDGKTGPQGPQGPTGRLVPGEIYSIGTYIIAALAPYTTDIGRTYQPGETVQGSRLKRCAIIKDASGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY

Physico‐chemical properties

protein length:	653 AA
molecular weight:	64140,79150 Da
isoelectric point:	6,76409
aromaticity:	0,01991
hydropathy:	-0,65681

Domains

Domains [InterPro]

DC_1608
STR
3–425

DC_1608 IPR008160

G3DSA:2.60.40.1120
STR
5–97

G3DSA:2.60.40.1120 PTHR24637 IPR008160 DC_1453

IPR008969
ATT
5–93

IPR008969 Coil IPR008160 G3DSA:1.20.5.320 Coil DC_1479

IPR005068
STR
396–437

IPR005068

XSB41399.1

1 653

Architecture

ATT

STR

ATT 3-93 | STR 94-650 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1608	STR	DC_1608	3	425	Novel HMM	DC_1608	Central	Low	Positional only	26 proteins / 26 hits
G3DSA:2.60.40.1120	STR	G3DSA:2.60.40.1120	5	97	Merged direct domain	G3DSA:2.60.40.1120	Central	Low	Positional only	6 proteins / 6 hits
IPR008969	ATT	IPR008969	5	93	Merged direct domain	Carboxypeptidase-like, regulatory domain superfamily	N-terminal	Low	Positional only	16 proteins / 16 hits
PTHR24637	Unmapped	-	102	315	PANTHER	COLLAGEN	-	-	-	-
Coil	Unmapped	-	208	228	Coils	Coil	-	-	-	-
IPR008160	STR	DC_0536	229	285	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	333	388	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	360	413	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1453	STR	DC_1453	395	509	Novel HMM	DC_1453	Central	Low	Positional only	102 proteins / 102 hits
IPR005068	STR	DC_0738	396	437	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
Coil	Unmapped	-	423	443	Coils	Coil	-	-	-	-
IPR008160	STR	DC_0536	447	503	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1479	STR	DC_1479	492	650	Novel HMM	DC_1479	Central	Low	Positional only	21 proteins / 21 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage PhiR5_2 [NCBI]	3416468	Viruses >
Host	Escherichia coli str. K-12 substr. MG1655 [NCBI]	511145	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

XSB41399.1 [NCBI]

Genbank nucleotide accession

PV340546.1 [NCBI]

CDS location

range 34951 -> 36912
strand +

CDS

GTGAGTGTTGTTGTTTCGGGGACGCTGAAATCGCCTGATGGTCAGGTTGTATCAGATGCGAACATTACGCTGACGGCGCTGACTGTTTCACCGGATGCACTCAGTGGCACCAGCGCGTCGGCAGTCACCACGTCAACAGGCTATTACGGCATGACGATGGAGCCGGGGGAGTATGCGGTTTCAGTGACGGTGAGAGGGAAGACTGCTGTCTACGGACGTGTGCGTATTGAGGGGACTGAAAGTACGGTGACGCTCAATATGCTGTTACGCCGCAGTCTTGTTGAGGTGAGCATACCCGGAGAACTGCTGACAGATTTCCGGCAGATACAGAACAATGTGGCGGATGACCTTGCCACGATTCGTCGTCTGAACGAAGACACGGCGGTGAAAAATAATCAGGCTTCACAGTCGAAGGAAAGCGCTGCTGCCAGTGCGAAGACTGCATCAGAAAGCGCGAAGGCTGCGACCAGCAAAGCGACGGAGTCTGCACAAAAAGCCAGTGAGGCTGCAGAGGCGGCGACCCGGGCAGGTGAGTCTGAAAAGGCAGCGGCAGCTGACGCTAAAGAGGCCAGACGACATGCTGAAACCGCCAGAGTGGCTCAGGAGGCCGCCGGAGACGTTCTTAAACGTGCTGAGGCTGCTACGGTTAGTGCTGAAGAAGCCAGACGTATGGCAGAGAATGCACGAGGACCTAAAGGCGATACAGGGCCGAAAGGTGATGCTGGTCCTCGTGGTGAAACAGGTCCGGCGGGTCCGCGTGGGGAGAAAGGTGAGCAGGGAGAGCGCGGACCTCAGGGCATACCGGGCCAGAAAGGTGATACAGGAGAACGGGGACCTCAGGGAGTGCAGGGGCCAGCTGGCCCACGTGGTGCGACCGGGCCACAGGGAGCAATGGGGCCGCGTGGTGAAACCGGGGCCAGAGGCGAAAAAGGAGACCCGGGGGGGCCTCAGGGACCAAAGGGGGATACTGGTCCGAGAGGTGAGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACAGGGTCCGGCAGGGCAAACCGGCCCTAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGAGAAACCGGCCCCGCAGGTCCTGCGGGTCCCGCAGGCAGTGTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGTACAGCTGAGCAGCGATACCAACAGCGATGATGAAACAAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAGTGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAACCCGGGCAGCAGTCCCCGGACCGAAGGGGGACAGGGGGGAACCTGGCGCACCTGGTGCAGTGGGGCCCGCAGGCCCACGGGGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCGGCAGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGCAGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAGCGGGGGCACAGGGTGTTCCGGGGCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACAGGGCCCTGCCGGAGGGCGAGGGCCGATGGGACCGCCCGGGTTGGATGGTAAAACCGGACCACAGGGACCACAAGGGCCAACCGGAAGGCTGGTACCCGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGCCCCGTATACAACCGACATCGGCAGAACCTATCAGCCAGGAGAAACTGTACAGGGTTCACGCCTTAAGCGATGCGCCATAATCAAAGATGCAAGCGGGAACTATATGAAAGCTAACACCGATGGCATTGACGGCAACCTATCCTCAGTTCCGGGCTCATGGATGGTGTGTAATGAAATTACGTCGACAAATGACAATGAAGGCATCGGGCTGTTCCAGCGCGCATACTGA

Genome Context

Tertiary structure

PDB ID

d9323776af8e744e7dcdb99e9ad7bb7267aba325613f6c3258a861d42f9f884d

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6501

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages	Brenes,L.R. and Laub,M.T.	2025	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature