Protein

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Genbank accession
QIG72525.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MSYIGAETPEVAYGKLDSSNNLSDLISLPKSRANLLVDNLPGFRNKIINGDFDIWQRGTSQTSSGYGSDDRWMNLNIGTTKTASRQSFTLGHTEVPNNPSYFSRTVVASVAGSGNYAVKSQAIEGVHFLANKTVTVTFYAKADTNRNIALEFYQSFGSGGSPSTSVSIPLGLVSLTSSWKRYSILVTLPSISGKILGSDSNHTLILNFWFDAGSTLASRASNLGQQSGTFDLSHVSVVEGDAQYETDPFSKRHLGDEIRLCYRYYTKSLNAVTWQGDTISGATYTTMLYFPVTMRTAPTLGLTIIGVNSFPSSTPTTDDLNADRCRVYLTANATNQSGFYQFQFTADAES
Physico‐chemical
properties
protein length:350 AA
molecular weight: 38052,78160 Da
isoelectric point:6,20786
aromaticity:0,10857
hydropathy:-0,24000

Domains

Domains [InterPro]
DC_0568
STR
6–350
DC_0568
IPR008979
STR
47–239
IPR008979
G3DSA:2.60.120.260
STR
49–237
G3DSA:2.60.120.260
QIG72525.1
1 350
Architecture
STR
STR 6-350
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG72525.1
1 350
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,1406
Central domain 202 339 139 0,0351
C-terminal 340 350 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-339
C-terminal
340-350

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_6
[NCBI] 		2509763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72525.1 [NCBI]
Genbank nucleotide accession
MN988524.1 [NCBI]
CDS location
range 175216 -> 176268
strand -
CDS
ATGTCATATATTGGAGCAGAAACTCCTGAAGTTGCTTATGGTAAATTAGACAGTTCTAATAATCTAAGCGACTTAATTTCACTACCTAAATCACGTGCTAATCTACTAGTTGATAATCTGCCAGGTTTCAGAAATAAGATTATCAACGGTGACTTTGATATATGGCAACGAGGTACTTCTCAGACATCTTCTGGTTACGGATCTGATGATCGATGGATGAATCTGAATATCGGAACTACTAAAACTGCATCCAGGCAGTCATTCACATTGGGTCATACTGAAGTTCCAAATAATCCGTCTTACTTCAGTCGTACAGTTGTAGCCTCTGTAGCAGGTTCTGGAAATTATGCTGTAAAATCACAAGCTATAGAAGGTGTTCATTTTCTAGCTAACAAAACAGTTACAGTTACATTTTACGCTAAAGCTGATACTAATCGTAATATTGCTCTAGAATTTTACCAAAGTTTTGGTAGTGGTGGATCACCATCAACTTCAGTTTCGATCCCACTAGGTCTAGTATCTCTTACATCATCATGGAAGAGATACTCTATACTTGTAACTCTCCCATCGATTTCAGGAAAAATTCTAGGAAGTGATAGCAATCATACACTAATACTCAACTTCTGGTTTGATGCTGGATCGACTCTTGCGAGTCGAGCAAGTAACTTAGGTCAACAGTCTGGAACATTTGATCTATCTCATGTATCTGTAGTAGAGGGTGACGCTCAATATGAAACTGACCCTTTTTCAAAAAGACATCTAGGTGATGAAATCAGACTGTGCTATCGGTACTACACAAAATCATTAAATGCAGTTACATGGCAAGGTGATACGATTTCAGGTGCTACATATACTACGATGTTATATTTTCCTGTAACAATGAGAACTGCTCCTACACTTGGACTTACTATAATCGGTGTTAATAGTTTTCCTAGTAGTACGCCAACTACTGATGACTTGAATGCCGATAGATGCAGAGTATATCTAACTGCTAATGCAACAAATCAAAGTGGATTTTATCAGTTCCAATTTACAGCTGACGCTGAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35e32684bd38533868ae98d906c6c157b6e63a8b274e5823a547485a7bd462cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank