Protein

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Genbank accession
WNA15787.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAYIPNKLYCGFKSESSDSLVAFMTPMAEDSAFAKRKSSVDSWRDNNLQTLELDNTPMLGFRFVDTSRRWNSNNVVFRVIHPGAGAEFEISAENLCMLMETCDIIKGEITTKLLLIRDGSKNVLVPENSTLHLGAAKVDAKGREIYVDKSLVKVGSAITVKSYGKVVNFDKEQIHTVRVEVKETRNSLNQSYSYGMTRYYDFIISERTINEFIMFDEKSKIVKTLTTRPKVLALEGQTSLTKDDLIGKSYLYYGEHVYAYGDISTKQFKYELVKFDPTTESHNHSYIILKTNTGEMHIGSYNKWHKRFDSFGEVVFDENSGELLPKNGNFAYGTPALVLSGDYYYIAKVEV
Physico‐chemical
properties
protein length:351 AA
molecular weight: 39882,82490 Da
isoelectric point:6,47398
aromaticity:0,11396
hydropathy:-0,34843

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNA15787.1
1 351
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,1530
Central domain 18 216 200 0,2833
C-terminal 217 351 134 0,9010
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-351

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XaC1
[NCBI] 		3073039 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNA15787.1 [NCBI]
Genbank nucleotide accession
OR258281 [NCBI]
CDS location
range 68846 -> 69901
strand +
CDS
ATGGCATATATCCCTAACAAATTATATTGTGGTTTTAAATCTGAAAGTTCAGATTCACTTGTTGCATTTATGACCCCTATGGCTGAAGATTCAGCCTTTGCTAAACGCAAGAGTTCTGTTGATTCGTGGCGTGATAATAATTTACAAACACTTGAATTAGATAACACTCCAATGCTGGGTTTCCGCTTTGTAGATACTTCCCGCCGCTGGAATAGTAATAATGTAGTTTTTCGTGTTATTCATCCGGGTGCTGGTGCAGAATTTGAAATCAGTGCTGAAAATCTTTGTATGCTAATGGAAACATGCGATATTATTAAAGGTGAGATTACTACTAAACTACTACTAATTCGTGATGGTTCTAAAAATGTTTTAGTACCAGAGAATTCAACTCTACATTTAGGTGCAGCTAAAGTAGATGCAAAAGGACGTGAGATTTACGTAGATAAATCACTTGTAAAAGTGGGAAGTGCTATTACCGTTAAAAGTTATGGTAAAGTTGTGAACTTTGATAAAGAACAGATTCATACTGTTCGTGTTGAAGTTAAAGAAACACGTAATAGCCTTAATCAGAGTTATAGTTATGGTATGACCAGATATTATGACTTCATTATTTCGGAACGAACTATTAACGAATTTATTATGTTTGATGAAAAGTCCAAGATTGTTAAGACATTGACAACTAGACCTAAAGTACTTGCACTTGAAGGTCAGACTTCATTAACCAAGGACGATTTAATTGGTAAAAGCTATTTGTACTATGGTGAACATGTTTATGCTTATGGTGATATTAGTACTAAACAATTCAAATATGAATTAGTTAAATTTGATCCAACTACCGAAAGCCATAATCATAGTTATATTATTTTGAAAACCAATACTGGTGAAATGCATATTGGTTCATATAACAAATGGCATAAAAGATTTGATTCTTTTGGTGAAGTTGTTTTTGATGAAAATTCTGGTGAACTTCTTCCAAAAAATGGCAATTTTGCATATGGTACACCAGCTTTAGTACTAAGTGGCGACTATTATTATATTGCTAAGGTTGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97e5182d0228fcb1a5ce826d73f4d3680dcd750af98487f5004ed77b187d8c09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi,L.M., Villicana,M.C., Amarillas,L.A., Carrillo,A. and Leon,J. 2014-03-01 — GenBank