Protein

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Genbank accession
QHB43001.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MAIYRQGQASMDAQGYVTGYGTKWREQLTLIRPGATIFFLTQPLQAAVITEVISDTSIRAITTGGAVVQKTNYLILLHDSLTVDGLAQDVAETLRYYQGKESEFAGFIEIIKDFDWDKLQKIQEDVKTNADAAAASQQAAKTSENNAKTSATNAANSKKGADTAKAAAESARDAANTAKTGAEAAKSGAESARDAANTAKAGAESARDQAEEYAKQAAEPYKDLLQPLPDVWIPFNDSLDMITGFSPSYKKIVIGDDEITMPGDKIVKFKRASTATYINKSGVLTNAAIDEPRFEKDGLLIEGQRTNLLINSTNPSKWNKSSNMILDRSGVDDFGFQYAKFTLKPEMVGQTSAINIVTVSGSRGFDVTGNEKYVTISCRAQSGTPNLRCRLRFENYDGSAYAFLGDAYVNLTDLSIEKTGGAANRITARAVKDEASKWIFFEATIKALDTENMIGAMVQYAPAKDGGGTGADDYIYIATPQVEGGVCASSFIITEATPVTRASDMVTIPIKNNLYNLPFTVLCEVHKNWYITPNAAPRVFDTGGHQSGAAIILAFGSAEGDNDGFPYCDIGGSNRRVYENAKLKKMIIGMRVKSDYNTCCVSNARISSETKTEWRYIVSTATIRIGGQTSTGERHLFGHVRNFRIWHKALTDHQLGEIV
Physico‐chemical
properties
protein length:659 AA
molecular weight: 71545,51060 Da
isoelectric point:5,96624
aromaticity:0,08498
hydropathy:-0,31836

Domains

Domains [InterPro]
DC_1059
STR
1–658
DC_1059
NF048003
Unmapped
300–502
NF048003
QHB43001.1
1 659
Architecture
STR
STR 1-658 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHB43001.1
1 659
Domain Start End Length (AA) Confidence
N-terminal 1 488 488 0,4289
Central domain 489 648 161 0,5087
C-terminal 649 659 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-488
Central
489-648
C-terminal
649-659

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_XY3
[NCBI] 		2681376 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tunus
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB43001.1 [NCBI]
Genbank nucleotide accession
MN781674 [NCBI]
CDS location
range 34381 -> 36360
strand -
CDS
ATGGCGATTTACAGACAAGGCCAAGCGTCTATGGACGCGCAAGGTTATGTAACTGGTTACGGTACAAAATGGCGTGAGCAATTAACCTTGATTCGCCCAGGAGCAACTATTTTCTTTCTTACTCAACCTTTGCAAGCTGCTGTGATTACAGAAGTGATTAGCGATACAAGCATTCGCGCAATTACTACTGGCGGCGCGGTAGTACAGAAGACAAATTACCTGATCTTGCTTCATGACTCGTTAACGGTTGACGGTCTTGCGCAAGACGTAGCGGAAACGCTGCGTTATTACCAGGGGAAGGAATCGGAGTTTGCTGGATTTATTGAGATCATCAAGGATTTTGATTGGGATAAGCTACAGAAGATCCAGGAAGACGTAAAGACAAATGCTGACGCAGCAGCAGCAAGCCAGCAGGCAGCTAAAACCAGCGAGAATAACGCGAAGACAAGCGCAACAAATGCAGCGAATAGCAAGAAAGGTGCTGATACTGCAAAGGCTGCCGCTGAATCCGCGCGCGACGCTGCAAACACTGCAAAGACTGGCGCTGAAGCAGCAAAGTCTGGCGCTGAATCCGCGCGTGACGCTGCGAACACTGCAAAGGCAGGAGCTGAAAGTGCGCGAGATCAAGCGGAGGAATACGCAAAGCAGGCGGCAGAACCTTACAAGGACTTATTGCAACCGTTGCCGGACGTGTGGATACCATTTAATGACTCCCTGGATATGATTACCGGATTCTCGCCGTCATACAAAAAGATTGTTATAGGTGACGATGAGATCACGATGCCAGGTGACAAGATAGTTAAGTTTAAACGAGCATCAACCGCTACTTACATTAATAAGTCTGGGGTGCTTACTAATGCTGCTATTGATGAACCTAGATTTGAAAAGGATGGTCTGCTCATTGAGGGGCAAAGAACAAACCTTCTTATAAATAGTACCAATCCTTCAAAATGGAACAAGTCATCAAATATGATCTTAGATAGATCAGGTGTAGATGATTTCGGATTCCAGTACGCAAAATTTACATTAAAACCAGAAATGGTAGGACAAACTTCAGCGATTAACATAGTAACCGTTTCCGGCAGTAGAGGTTTTGATGTAACAGGAAATGAAAAGTATGTAACCATATCATGCAGGGCGCAAAGTGGGACTCCAAATTTAAGATGCCGATTACGATTTGAAAACTACGATGGATCTGCTTATGCATTTTTGGGTGATGCTTACGTAAATCTGACAGATTTATCAATTGAAAAAACTGGCGGCGCTGCAAATCGTATTACTGCAAGGGCTGTTAAAGATGAAGCAAGCAAATGGATTTTCTTTGAGGCAACAATTAAAGCGCTTGATACAGAAAATATGATCGGTGCAATGGTGCAGTATGCACCAGCAAAAGATGGAGGGGGCACTGGTGCAGATGATTATATTTATATTGCTACCCCTCAAGTTGAAGGAGGTGTGTGCGCTTCATCGTTTATTATTACAGAAGCGACTCCAGTAACACGGGCAAGCGATATGGTGACAATCCCAATCAAGAATAACCTTTATAATCTTCCTTTTACTGTTCTTTGTGAGGTACATAAGAACTGGTATATAACGCCAAATGCTGCGCCTCGTGTTTTCGATACTGGAGGTCATCAATCTGGTGCGGCAATTATTCTTGCTTTCGGGTCTGCCGAGGGCGATAATGATGGATTCCCTTATTGCGATATAGGTGGATCAAACAGAAGGGTTTACGAGAATGCAAAACTAAAAAAGATGATCATAGGAATGAGAGTAAAGAGTGATTACAATACTTGTTGTGTAAGTAATGCCAGAATATCAAGCGAAACAAAAACGGAATGGAGATATATAGTATCAACGGCTACTATAAGGATTGGCGGACAAACAAGTACAGGCGAACGCCATCTTTTCGGTCACGTTAGAAACTTCCGTATATGGCACAAGGCACTAACAGATCATCAATTGGGGGAAATTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0752962db45055594c8fa5413df0a07156cddb982a423b9eb2df91aad31f5b13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of a Escherichia coli bacteriophage Fu,P. and Zhao,Q. 2015-02-05 — GenBank