Protein

View in Explore
Genbank accession
YP_009784300.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAANELIPWINSAGEGGVRNSMQEYPGKGTNGPFEFNFAGGYIDPSHVKAYRYDPVSARTYPQTLTFLGPNQVRTSDVIPVGQYVVLYRDTPKNQPLVDYSEGAVMDEANLDKSNDQSVFIAAEMLDRFDAINATSSEAIDRSATALNTANSALSKSDTAIKTADAATATAGSAVITANGAVTTANAATQTANGAKATAEGIDAKAQSALDASANAVTTANGAKATANAIDGKAQSALDASTNAVNTASAANTKADGAVATANAVGSKADSAVSTANGAKETADAASAAVGSKVNRAGDTMTGALKNTTASGSGAAGAFHTTGDIGGAFVDWVNARIYGVQVDAARSTSAYGGIRWTRWGGRHLAAIDAYEGGSGSTQPTIVMQLANVTNAWTFSPYDISRGAGGYVWGSWNFDPNSKANVGGQIFTGEIGSRLNGDQGYYGRFGQGYIKLARWDYGGYIDLMRAQDQDYRWRIHYEYNGDNLELMSNGGQTFTFTRDGNIYCGGRGWVWGSIDARAWAGARVQWDSGAIEVGPIGNGTIDLPAPYVCVGARTCGGSSTANCIWLRGVILRNQ
Physico‐chemical
properties
protein length:573 AA
molecular weight: 59616,71150 Da
isoelectric point:5,21358
aromaticity:0,08901
hydropathy:-0,28237

Domains

Domains [InterPro]
DC_0044
STR
7–570
DC_0044
IPR005604
ATT
21–130
IPR005604
YP_009784300.1
1 573
Architecture
STR
ATT
STR
STR 7-20 | ATT 21-130 | STR 131-570 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Bp-AMP1
[NCBI] 		1432428 Uroviricota > Caudoviricetes > Autographivirales > Ampunavirus > Ampunavirus BpAMP1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009784300.1 [NCBI]
Genbank nucleotide accession
NC_047743 [NCBI]
CDS location
range 40061 -> 41782
strand +
CDS
ATGGCTGCAAACGAACTCATTCCGTGGATTAATTCGGCGGGTGAGGGCGGGGTTCGGAACTCGATGCAGGAGTACCCCGGCAAAGGCACGAATGGTCCCTTCGAGTTCAACTTCGCAGGCGGCTATATCGACCCGTCGCACGTCAAGGCTTACCGCTACGATCCCGTATCGGCCCGGACGTACCCGCAAACCCTCACCTTTCTCGGCCCCAATCAAGTCCGCACGTCGGACGTGATCCCTGTGGGCCAGTATGTCGTGCTGTACCGCGACACCCCAAAGAACCAACCGCTTGTCGATTACAGCGAAGGTGCTGTGATGGACGAAGCGAACCTCGACAAGAGCAACGACCAGTCCGTGTTCATCGCGGCTGAAATGCTCGACCGATTCGACGCGATCAACGCAACCTCAAGCGAGGCTATCGACCGTTCGGCGACTGCGCTGAACACGGCGAACTCCGCGCTCTCGAAGTCGGACACGGCAATCAAGACAGCCGACGCCGCAACCGCAACCGCTGGTAGCGCCGTCATCACGGCGAACGGCGCGGTGACTACCGCGAACGCGGCGACTCAAACGGCCAACGGTGCCAAGGCAACCGCCGAGGGCATCGACGCGAAGGCACAATCCGCGCTCGACGCGTCGGCCAACGCCGTCACAACCGCCAACGGTGCGAAGGCAACCGCCAACGCGATTGACGGTAAGGCGCAGTCGGCACTCGATGCCTCGACCAACGCGGTCAACACCGCGAGCGCCGCGAACACCAAGGCCGATGGCGCAGTCGCAACCGCGAACGCAGTCGGCTCTAAGGCCGATAGCGCGGTGTCCACCGCCAACGGCGCGAAGGAGACCGCCGACGCCGCAAGTGCTGCCGTCGGTTCCAAGGTGAACCGCGCAGGCGACACGATGACCGGTGCGCTAAAGAACACCACTGCCAGCGGGAGCGGCGCGGCTGGCGCGTTCCATACCACCGGTGACATTGGTGGCGCATTCGTTGATTGGGTCAACGCCCGCATCTACGGGGTGCAGGTTGACGCCGCGAGATCAACTTCGGCGTACGGCGGCATTCGATGGACCCGTTGGGGCGGTCGTCACCTCGCAGCTATTGACGCATACGAGGGCGGTAGCGGTTCGACGCAGCCAACTATCGTGATGCAGCTTGCGAACGTGACAAACGCGTGGACGTTCAGCCCGTACGACATCAGCCGTGGCGCAGGTGGCTATGTGTGGGGATCGTGGAACTTCGACCCGAACAGCAAGGCTAACGTCGGCGGTCAAATCTTCACAGGCGAGATCGGCTCGCGCCTCAACGGCGACCAAGGCTACTACGGGCGCTTCGGTCAAGGCTACATCAAGCTGGCCCGGTGGGACTACGGCGGCTACATCGACTTGATGCGCGCTCAGGACCAAGACTATCGCTGGCGCATTCACTACGAATACAACGGCGACAACCTTGAGTTGATGTCGAACGGCGGGCAGACCTTCACGTTCACTCGTGACGGGAATATCTACTGCGGCGGTCGCGGATGGGTGTGGGGTTCCATTGATGCCCGAGCTTGGGCGGGTGCCCGAGTGCAGTGGGACAGCGGCGCGATTGAAGTTGGCCCTATCGGCAACGGCACTATCGACCTCCCTGCTCCGTATGTTTGCGTCGGTGCTCGCACCTGCGGCGGCTCGTCCACAGCGAACTGTATTTGGCTGCGCGGCGTCATTCTGAGGAACCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
365e179dbfb5e2bbda3593a4480dd6f431e9a6f5f35bfe7296b8959dec8067dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel phages display a temperature dependent lifestyle choice that underpins the population dynamics of a tropical bacterial pathogen Shan,J., Korbrisate,S., Adler-Lazer,N., Clokie,M. and Galyov,E. 2014-11-14 — GenBank