Protein

View in Explore
Genbank accession
YP_009817805.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDIEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTITLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDSRPTSVVDPDSLGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATTTLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGSEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDTILDEIFDSDAMKELQVSAQDSAAKLNDYANSIIQNALANDGNVRIMRKENGKRRAEIKRAEVLIANETEARVQQVNQISAEFNENLNAGLTQINEALANETESRVTSEEALSARIGQNSAALDQKLDSWANVNGVGSMYTMKLGLTYNGQEYNSGMALQLTSQGGNVVSQVLFIADRFAIIRNAESGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGGSEFNNVTVRGHIEANSGTFKGTLEAQSFIGDIAVARRYDDLSFRRNNTVQRDGYYQNRGYSMTIVLSCTLIYEVTGGEDARNGYIVEITFNIGGQQVTRLFPVNPRLTSGIYAAEFRFSADIPANYSNTPFFVRAKGRGAHWDYSCQVENITATAFRTKIFQQITATLLSL
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 137477,35100 Da
isoelectric point:4,90290
aromaticity:0,09927
hydropathy:-0,29144

Domains

Domains [InterPro]
DC_0014
STR
1–1236
DC_0014
IPR053171
Unmapped
3–871
IPR053171 Coil IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
629–715
IPR036116
YP_009817805.1
1 1239
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1236 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009817805.1
1 1239
Domain Start End Length (AA) Confidence
N-terminal 1 503 503 0,8736
Central domain 504 1051 549 0,0597
C-terminal 1052 1239 187 0,7802
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-503
Central
504-1051
C-terminal
1052-1239

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage TSK1
[NCBI] 		2301532 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus TSK1 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009817805.1 [NCBI]
Genbank nucleotide accession
NC_048126.1 [NCBI]
CDS location
range 22365 -> 26084
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTGTTGCTTGCCGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATTCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTAACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGCGTTAGTCGAGTAACGCCGGATGCTGACGGGGTGAAGGTTGTCGATGCCTTCCAGGTTCAATCATACGCTGAGGTCATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCGCTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGCAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTTAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCTGTTGACAAGTGGTCGCTGTACGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGAGGGATGGAACCGCGCTATTTGATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCTTTCCAATTAGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATCATCGTCGACAAGCCGCGCGATCCTGTATACCTGTTCACGGCTGATAACGTCGTTGACGGCGTTTTCGTTAGGACGTTCCCAAGCGAAAAGACGATGTATACGTCATGCAACGTCATGTTCGACGACGAAGAAAACCAGTATGAACAGGATATTGAACCAGTGTTCAACCCGGATGCAGCCATGCGATTTGGCCACAACCCAACGAGCATTACAGCGATCGGGTGCACCAGAAGGACTGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACAAACCTAAGCGCCACAACCGTTTCGTTTTCTACTGGTCTGGAAGGTATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGCCGTGTTATGGAAGTATCCGGTACGCAGGTATTTTTAGCGTTCCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAGCGTTTCGGCGGACGGTAAGACCATCACGCTAAACGTTGGTTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATCGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAACGGGGTAATTACCGATAGCCGACCAACTTCGGTTGTAGACCCGGATTCATTGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGGATGAGCGTCGAAACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTTCAATGGCGTAAGGATGGTGGGAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATCGAAGGCATCTATGCTGGTGAATATCAGGCCCGCGTAAGGTGCATCAGCGGTGGGAATGTGGCGTCTCCGTGGTCTGCATTGGCAACCACCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTTGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGATCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCATTCAATTCTGCCCGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGTATGTCGTCGACTGACGTTAACGCCATCACGGATACGATCCTGGATGAGATCTTCGACAGCGACGCGATGAAAGAACTTCAGGTGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCTAACAGCATCATCCAAAACGCATTAGCGAATGATGGAAATGTTAGAATCATGAGAAAGGAGAATGGAAAGAGGAGGGCTGAGATTAAACGCGCAGAAGTTCTCATAGCAAATGAGACGGAAGCCAGGGTGCAGCAGGTTAACCAGATATCGGCAGAGTTCAACGAAAACCTCAATGCTGGATTAACTCAAATTAACGAGGCGTTGGCGAATGAAACTGAATCTCGCGTTACGTCGGAGGAAGCGCTATCGGCAAGGATTGGCCAGAACTCCGCAGCGCTAGATCAGAAACTTGATTCGTGGGCAAACGTTAATGGAGTTGGTTCAATGTATACAATGAAGCTGGGGCTGACTTACAACGGCCAGGAATACAATTCCGGGATGGCCCTACAGCTTACCTCACAGGGTGGAAACGTTGTTTCTCAAGTTCTTTTTATTGCTGATAGATTCGCTATCATCCGAAATGCGGAGTCTGGAGCATACACGTTGCCGTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGATGGGTCTATTACCAACGCTAAGATCGGCAACGTCATTCAGTCCAACAACTACATCGCCGGACAGCAAGGATGGATGATTAACAAGAATGGAGGATCTGAGTTTAATAACGTTACCGTTCGCGGCCATATAGAGGCTAACAGCGGAACGTTCAAGGGCACCCTTGAGGCTCAGAGCTTCATAGGTGATATTGCTGTTGCCAGAAGATATGATGACTTGAGTTTTCGCAGAAACAACACCGTTCAGCGTGACGGGTACTATCAAAATCGCGGCTATAGCATGACGATAGTTCTTAGTTGCACATTAATCTATGAGGTTACAGGGGGTGAAGATGCCAGAAACGGATATATTGTTGAAATTACGTTCAATATTGGAGGGCAGCAGGTAACTAGACTTTTCCCGGTCAACCCAAGGCTAACATCTGGTATTTATGCTGCTGAATTTCGATTTTCCGCTGATATTCCAGCAAATTACAGCAACACTCCTTTCTTTGTGAGAGCGAAAGGGAGAGGCGCACATTGGGATTATAGTTGTCAAGTGGAGAATATCACAGCAACCGCATTCCGCACAAAGATATTCCAGCAAATTACAGCAACACTCCTTTCTTTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
df25e7bb9090fd015d8cd086f60feef7ec27e9fce5906cc8deb0e3095c52e844
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of a Siphoviridae phage TSK1 showing biofilm removal potential against Klebsiella pneumoniae Tabassum,R., Shafique,M., Khawaja,K.A., Alvi,I.A., Rehman,Y., Sheik,C.S., Abbas,Z. and Rehman,S.U. 2018 30559386 GenBank