Protein
View in Explore- Genbank accession
- XHB24368.1 [GenBank]
- Protein name
- long tail fiber protein proximal connector
- RBP type
-
TSP
- Protein sequence
-
MAEPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGNSFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGVVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGTSLLSSNVSLEVPKNGADRWLRFERFIAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTSHSEKLNSVVQEFGVNGIRMNKGVEGGTTMIMELPNSKVDPSGVIPVQSFRETSD
- Physico‐chemical
properties -
protein length: 378 AA molecular weight: 41762,25050 Da isoelectric point: 5,46879 aromaticity: 0,11111 hydropathy: -0,31349
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
378
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 65 | 65 | 0,4845 |
| Central domain | 66 | 264 | 200 | 0,4887 |
| C-terminal | 265 | 378 | 113 | 0,5103 |
Note: Constraints were applied during segmentation.
Fixed 34 C-terminal predictions appearing before Central domain
Fixed 34 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-65
1-65
Central
66-264
66-264
C-terminal
265-378
265-378
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_Kpn529046-KEN25_1 [NCBI] |
3142664 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Klebsiella sp. [NCBI] |
576 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XHB24368.1
[NCBI]
Genbank nucleotide accession
PP723049
[NCBI]
CDS location
range 56899 -> 58035
strand +
strand +
CDS
ATGGCTGAACCAATTTTAATGGCAGCCTTCGGCGAGGATTTCGTGGAAACACGAATCCTCTCTGAGGCAAACTCTGTGAAGTATTGGCTAAAAGCTTATGCTACACATTCTAATGCTGTTCCTAATAAGCCAGAATTGAATATTAACGGTGCCTTTGATATGACCTCCTCCTTACGGAGGGGGATTAATGTCGTTCAGGTTAACGGCAATAGTTTTATTAACTTTAAAACTTTTGATGTTACCACTGATGATAACAACGCTAATAACAAAGCGTTTGTAGAATATGCAAATGGATTAACTTCGGGATTGTATATTATAATGACGCATGAACGATTTCAGTCTAGTCCGTTGATAGATAGATGGTTTAAAAACAAGTGGTCTGCTTCTTGGCCAGGTTCTGACTTTTCTAAATCATTTCCAAACTCCGCCTATGTTGGAGTGCTCGGAGCAGCAAAAGGACGTATATTAATTGAGTCATTTTACGGAAATGATGGCGTAGTCAAAGAAGATTCCAGAGCTAAAGTCGATACAGTGTATGATAACGTTGGCGATGTAGGATATACAGGCTGCCCTTATCGTTCTATTGAAGATACCAATGAATACTCGGATTCTACTGGATATGAATATAAGCGATACCCAGTACAAAATGAATCTATAAGCAAAATAGCTGATTATGGATTATCTCCTGGGGATTCAGTGTTTTTAGTGTGTGATATGTATGCATCTAAAAGCCTTCTTGATGCGGGTTCTACAACTAGAGCTAGCTTGCGATGGTTCAAGGGCACATCTTTATTATCTTCAAACGTATCATTAGAAGTTCCAAAAAATGGAGCTGACAGGTGGCTAAGATTTGAAAGATTTATCGCTGTTCCTACAGACGCTGATGGATTTACTATTGTGGTATCAAGATATCCAAAAACGTCTGTAGTTGGTGACTCTAAAATCAAAAACCTTGTATTTGTTCAAACCTCTCACAGCGAAAAACTGAATAGCGTTGTTCAAGAGTTTGGTGTGAATGGTATAAGAATGAATAAAGGCGTTGAAGGAGGAACCACTATGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCAGACTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
f6ac3f2ec73cfd7d843ecad17bd5f42f22a82c38d130fd86031117fa9936f979
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete Genome Sequences of Five Klebsiella Phages That Belong to the Genus Jiaodavirus | Burke,K.A., Peters,T.L., Kirillina,O.A., Urick,C.D., Mzhavia,N., Musila,L., Nikolich,M.P. and Filippov,A.A. | 2024-12-12 | — | GenBank |