Protein

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Genbank accession
QQO92806.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MEDSILIIVPQKTYIPGKGMGPINKPYYVDRNTLDYYDLMNIQYVKVNKNEYVDLNSDGKYDISDYFSIEDFIKQKYLQINEAFKQIKIISKDVDSINKDTEEKLNSFKEKTINEEEINEYLSNLDKIKYDLEDKKIEIQENKENIENTFNEVKEELNQIESFLNDFEKVKDKFQNDYNNTMSLSEEMESLSSSVNMIASLKEEIKNIDDIINNFKNELNNQYNKTYKDIENIKNDYIEEIDSVIKESLKESFSKKEFKSTNHNITSSGENRPLITFIDDDGRNELKTKWEPILKEKKNKLTIATVTKWIDDKEPTVLQWDEIHDWNQKYGVEFVSHTHEHKHAQQLTDEEVEDELRLSRDILKREGLTYNIIVQPFGENTDSVRRISRKYYRANIGTKEGINTPPLDTFRINRITLGEPLYTTFEQYKEKIDEAIINKGWIIFKSHSQYESFDENQLNIIRQIIDYAREQEMIEVNLEEGLDYIGNLIDTGDYTRRSQNIDYYVMDRDGKVYSNFGEKNYYTLKYNTVSIDTPVTEFTDRTTSTVAIVSSNSQGFPNNSSGQLQTVKSESMGLSYQLFMPNNSNSIYKRRWNTTTNNWTEFEDIKSSSNSNTLIQKIESVDVVVPANNYKDVNFTIQGVTNSDNVIVSPGSGIEVGLVYNGFITTTDTVRLRLWNNTSDPITTKRPYKITVVKNDTSQNIIKGLKGDTGQIGPQGLQGLPGLDGNYAPTLPITVRKPKDFNYGNEILKDRIVTDGKGTFGVKYDITTNRLSGGTTYYLDAVNGNDSNDGLSKEKPFKSFKVAIPKVNDNDTIMVADGNYFRIGGTLITKAFNKSINIIGTGNNVNIVMADEPSWTLTSGKNRTYEFSRSATDKVVTLDNSIDIKKVNSIDEVESTPNSWFTDGTKVYSNINDNKPSNSNVIPLISSSNIQLTSLASNIYFENLNIYGGRNCVELNLTSNNSAFFKKCNFYHSASSYNGLAIVGGKNIILDSCKGNYNSFDGLNYHIGADGSKPNIIEINCIGMDNGTDKGLNGVKSNNGSTTHEGLKIIRINGIYGRNDGGNVADVNEGTQSWNLGCIAFESYQGKDFQASSGGNLFLDECIAYGSENSINIGDTDSKVYTRGGRYQNKLIVSTEIKY
Physico‐chemical
properties
protein length:1139 AA
molecular weight: 129243,08620 Da
isoelectric point:5,00504
aromaticity:0,09570
hydropathy:-0,67226

Domains

Domains [InterPro]
DC_0844
STR
7–152
DC_0844 G3DSA:3.20.20.370 IPR011050
Coil
Unmapped
125–173
Coil Coil IPR051398 DC_1219
IPR011330
RBD
271–484
IPR011330
cd10918
RBD
274–420
cd10918
IPR002509
RBD
275–390
IPR002509
QQO92806.1
1 1139
Architecture
STR
RBD
STR
STR 7-152 | RBD 190-484 | STR 774-1133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO92806.1
1 1139
Domain Start End Length (AA) Confidence
N-terminal 1 825 825 0,7112
Central domain 826 1128 304 0,9874
C-terminal 1129 1139 10 0,2016
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-825
Central
826-1128
C-terminal
1129-1139

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Madawaska
[NCBI] 		2797424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO92806.1 [NCBI]
Genbank nucleotide accession
MW349129.1 [NCBI]
CDS location
range 145678 -> 149097
strand -
CDS
ATGGAAGATAGTATACTAATTATAGTTCCTCAAAAAACTTATATTCCGGGTAAAGGTATGGGACCTATAAATAAACCTTATTATGTTGATAGAAATACATTAGATTATTATGATTTAATGAATATTCAATATGTAAAGGTAAATAAAAATGAATATGTTGATTTAAATTCAGATGGGAAATATGATATATCTGATTACTTCTCTATTGAAGATTTTATAAAACAAAAATATCTTCAAATTAATGAAGCTTTTAAACAGATAAAAATAATTTCTAAAGATGTTGACAGTATTAATAAAGACACAGAAGAAAAACTTAATTCATTTAAAGAAAAAACAATAAATGAAGAAGAAATAAATGAATATTTAAGCAATCTAGATAAAATTAAATATGATTTAGAAGATAAAAAGATAGAAATTCAAGAAAATAAAGAAAATATTGAAAATACATTTAATGAAGTTAAAGAAGAATTGAATCAAATTGAATCATTTTTAAATGATTTTGAGAAAGTAAAAGATAAATTTCAAAATGATTATAATAATACTATGAGTTTATCTGAAGAAATGGAAAGTTTAAGTTCCAGTGTAAATATGATTGCAAGTTTAAAAGAAGAAATAAAAAATATTGATGATATAATAAATAACTTTAAAAATGAATTGAATAATCAATATAATAAAACTTATAAAGATATTGAAAATATCAAAAATGATTATATTGAAGAAATAGACAGTGTTATAAAAGAATCATTAAAAGAAAGCTTCTCAAAAAAAGAATTTAAATCTACAAATCATAATATAACTTCTAGTGGAGAAAATAGACCTTTAATTACATTTATTGATGATGATGGTAGAAATGAATTAAAAACAAAATGGGAACCTATATTGAAAGAAAAGAAAAATAAACTTACAATAGCGACAGTTACTAAGTGGATTGATGATAAAGAACCTACAGTTCTTCAATGGGATGAAATACATGATTGGAATCAAAAATATGGCGTTGAATTTGTAAGTCATACTCATGAACATAAGCACGCTCAGCAACTTACGGATGAGGAAGTAGAAGATGAGTTAAGATTGTCTAGAGATATTTTAAAAAGAGAAGGTCTAACATACAATATTATTGTCCAACCTTTTGGTGAAAATACCGATTCTGTAAGAAGAATTTCTAGAAAATATTATAGAGCTAATATTGGAACTAAAGAAGGAATCAATACACCTCCTTTAGATACTTTTAGAATTAATCGTATCACATTAGGTGAACCACTATATACAACTTTTGAACAATATAAAGAAAAAATAGATGAAGCAATCATAAATAAAGGTTGGATAATATTTAAATCTCATTCTCAATATGAATCTTTTGATGAAAATCAATTAAATATTATTAGACAAATTATAGATTATGCTAGAGAACAAGAAATGATTGAAGTGAATTTAGAAGAAGGATTAGATTATATAGGTAATTTAATAGATACAGGAGACTATACGAGAAGAAGTCAAAATATAGATTATTATGTGATGGATAGAGATGGTAAAGTTTATTCAAACTTTGGAGAAAAGAATTACTATACTTTAAAATATAATACCGTAAGTATTGATACTCCTGTAACAGAGTTTACTGATAGAACAACTTCAACGGTTGCAATTGTATCTTCGAATTCTCAAGGTTTTCCAAACAACTCATCAGGACAGTTACAGACGGTTAAATCAGAAAGCATGGGATTAAGCTATCAATTGTTTATGCCAAATAATAGTAATAGTATCTATAAACGTAGATGGAATACAACAACAAACAATTGGACTGAATTTGAAGATATTAAAAGTTCTTCAAATTCCAATACTTTAATACAAAAAATAGAATCAGTGGATGTTGTAGTACCTGCTAATAATTATAAAGATGTTAATTTTACAATTCAAGGTGTTACAAATTCAGACAATGTTATTGTTTCTCCTGGATCTGGTATAGAAGTGGGATTAGTTTATAATGGTTTTATAACAACGACAGATACTGTTAGACTTAGATTATGGAATAATACAAGTGATCCCATAACAACAAAAAGACCATATAAGATAACAGTTGTGAAGAATGATACATCACAAAATATAATTAAAGGTCTAAAAGGTGACACAGGTCAGATTGGACCTCAAGGTTTGCAAGGTTTACCTGGCCTTGATGGAAATTATGCTCCTACTCTTCCAATAACAGTTAGAAAACCTAAAGATTTTAATTATGGAAATGAGATACTAAAAGATAGAATAGTTACTGATGGTAAGGGTACTTTTGGAGTGAAATATGATATAACTACTAATAGATTATCAGGAGGAACTACTTACTACTTAGATGCTGTTAATGGTAATGATTCCAATGACGGTTTATCTAAAGAAAAACCATTTAAATCTTTTAAAGTAGCAATACCTAAAGTCAATGATAATGATACAATTATGGTTGCTGATGGCAACTATTTTAGAATCGGTGGTACATTAATTACAAAAGCATTTAATAAGAGTATTAATATAATAGGTACAGGTAATAATGTGAATATTGTTATGGCTGATGAACCTTCATGGACACTAACTTCTGGTAAAAATAGAACTTATGAATTTAGTAGATCTGCTACCGATAAAGTTGTAACTCTAGATAATAGTATTGATATAAAGAAAGTAAATAGTATTGATGAAGTTGAAAGCACGCCTAATTCATGGTTTACTGATGGTACTAAAGTTTATTCAAATATTAATGATAATAAACCTTCAAATAGTAATGTAATACCTTTAATATCTTCTTCAAATATACAGTTAACAAGTCTAGCTTCAAATATATATTTTGAAAATTTAAATATATATGGTGGAAGAAACTGTGTTGAATTGAATTTAACTTCAAATAATAGTGCATTCTTTAAGAAATGTAATTTTTATCATTCTGCTTCAAGTTACAATGGTCTTGCTATTGTTGGTGGAAAAAATATTATTCTTGATAGTTGTAAAGGTAATTATAATAGTTTTGATGGTTTAAATTACCATATTGGTGCCGATGGTTCTAAACCTAATATAATAGAAATTAATTGTATAGGAATGGATAATGGAACTGATAAAGGATTGAATGGCGTTAAATCAAATAACGGATCAACTACTCATGAAGGTTTAAAAATCATTAGAATAAATGGTATATATGGAAGAAATGATGGAGGTAATGTAGCTGATGTAAATGAAGGTACACAATCGTGGAATTTAGGATGTATCGCATTTGAAAGTTATCAAGGAAAAGACTTCCAAGCTTCATCAGGAGGTAATTTATTCTTAGATGAATGTATAGCTTATGGATCTGAAAATAGTATTAATATAGGTGACACTGATAGTAAAGTTTACACTAGAGGTGGAAGATACCAAAATAAATTAATCGTATCTACAGAAATCAAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30c5dd08a144c2af55843165a3f343875def7328b7dbcbff5f82e39fd600ee43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus phage Madawaska Korn,A., Hillhouse,A. and Gill,J. 2019-07-18 — GenBank