Protein

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Genbank accession
XLM29942.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNKAYTWNEKTGLDFCRELPQWNLLTRSNLRFLKGDTSEEPDKFDPSHYFKLNALSEVDKTSQFPSDWHRPYSLGIRLYNPKNATGMWGWKYWTHWEKLPVKPNLTQGKKMGVSMRLTNFGRKPLDFTLKLFYGNSVVGVGTYTVKPWEYVFVSELVTLQNTETAENLGLSVELDSTGQEEQIGLFFPKIEMDKVTPYVTTEEEYNYFKSQDMADSRPVYTGYSETDSNDFKDYVWGGQLNDENYELFGGDTKQNAVWCYCRPLNQRVLIGIDSDTYTNASGRTVNFHVLNGSKSVFDMTGNTLYPEQFQDARQAFDSVGNDWATIQEPLYVVDQNTAIDPVAGEMANVVIEGYHYQQASQGYRVDEIPRSAILNVGYSLGSYYVNEDSGKEVEVMRNRVGITPPQVFGEPSYSSMNDWMTTNGLPNGLIMRPWRVRMVDTETNLTKIKGISIGWNVSLFQKYLATDHMSEDWFRGYDNKRTKAIPDRVLFINDKQKRAWLYKYNPTKSAWERSVEYTIPASNTALLKAWTIVPNDGAMNGHIVFTDKTNVEMLQNIRPNWLDYDEFTPKVQYDEVKYNPQMFTNLYNTRYQWWGIKDENPQNQSYGPCVPYEMDFMTGLCKLERIYE
Physico‐chemical
properties
protein length:628 AA
molecular weight: 72815,76080 Da
isoelectric point:5,14833
aromaticity:0,13694
hydropathy:-0,64650

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLM29942.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,6784
Central domain 21 376 357 0,6841
C-terminal 377 628 251 0,1746
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-376
C-terminal
377-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage vL_84
[NCBI] 		3385195 Viruses > unclassified bacterial viruses >
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM29942.1 [NCBI]
Genbank nucleotide accession
PQ594013.1 [NCBI]
CDS location
range 1849 -> 3735
strand +
CDS
TTGAATAAGGCATATACTTGGAATGAAAAAACAGGGCTAGACTTTTGTAGAGAGTTGCCACAATGGAACTTGTTGACACGTTCTAACCTTAGGTTTTTAAAGGGCGACACATCAGAAGAACCTGACAAGTTTGACCCTAGTCATTACTTTAAATTGAACGCTTTGAGTGAAGTAGACAAAACCAGTCAATTCCCTAGCGATTGGCACAGACCTTATAGCTTAGGCATTAGACTTTATAACCCTAAAAACGCCACAGGAATGTGGGGGTGGAAATATTGGACACATTGGGAAAAATTGCCAGTAAAGCCAAACCTCACACAAGGCAAAAAAATGGGTGTTTCAATGCGTTTAACTAATTTTGGTAGAAAACCCTTAGACTTTACTTTAAAACTCTTCTACGGCAATTCTGTGGTTGGTGTTGGTACTTACACAGTTAAACCTTGGGAATATGTTTTTGTAAGTGAGTTAGTTACTTTACAAAATACGGAAACGGCTGAAAATCTAGGCTTATCTGTTGAATTAGACAGTACAGGACAAGAAGAACAAATCGGTTTGTTTTTCCCTAAGATTGAAATGGACAAGGTAACACCATACGTTACAACAGAAGAGGAATACAACTATTTCAAAAGCCAAGATATGGCAGATTCAAGACCAGTATACACAGGCTATTCTGAAACGGATAGTAACGATTTTAAAGATTACGTTTGGGGCGGACAGTTAAACGATGAAAATTATGAACTATTTGGCGGAGATACAAAACAGAATGCGGTATGGTGCTATTGTCGTCCTCTTAATCAACGTGTATTGATTGGAATTGATTCTGATACGTATACAAACGCAAGTGGTAGAACAGTTAATTTTCACGTTTTAAACGGTTCTAAGAGCGTGTTTGACATGACAGGTAACACTTTATACCCAGAGCAGTTCCAAGACGCTAGACAGGCTTTTGACAGCGTTGGGAACGATTGGGCAACAATACAAGAACCGTTGTATGTGGTAGACCAAAACACGGCAATTGACCCAGTAGCAGGAGAAATGGCGAACGTAGTAATAGAGGGTTACCACTATCAACAAGCTAGCCAAGGTTATAGGGTTGATGAAATACCACGTTCGGCAATTTTAAACGTTGGTTATTCTTTAGGTTCTTATTACGTGAATGAAGATTCAGGTAAAGAAGTTGAAGTTATGCGTAACAGGGTTGGTATAACACCACCGCAAGTTTTTGGAGAGCCAAGTTATAGCAGTATGAACGACTGGATGACTACAAACGGACTACCAAACGGCTTAATCATGCGACCTTGGAGAGTTAGAATGGTAGACACAGAAACGAACTTGACAAAAATCAAGGGTATTTCAATCGGTTGGAATGTTTCTCTGTTCCAAAAATACTTAGCAACAGACCACATGAGTGAGGACTGGTTCAGAGGTTATGACAACAAGCGTACTAAGGCAATACCAGACCGTGTTTTATTCATCAATGATAAACAAAAAAGAGCATGGCTTTATAAGTACAACCCTACCAAATCAGCATGGGAACGTTCGGTAGAATACACCATACCAGCTTCAAACACGGCACTATTAAAGGCTTGGACCATTGTACCAAATGACGGTGCGATGAATGGGCATATAGTTTTCACAGACAAAACTAACGTTGAAATGCTTCAAAACATTCGCCCTAACTGGTTAGATTATGACGAGTTCACTCCTAAAGTGCAGTACGACGAAGTTAAGTATAACCCTCAAATGTTCACGAACTTGTACAACACACGTTATCAATGGTGGGGAATTAAAGACGAAAACCCACAAAATCAGTCTTATGGTCCTTGTGTTCCGTATGAAATGGACTTTATGACAGGACTATGCAAATTAGAAAGGATATACGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62a7984dbd5a3fa8fe733bff5e465a088635b21fed8db8c14abe5bb4ac2deba0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50