Protein

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Genbank accession
UJH95989.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIPNLVGFIWNGASDRTFSVQAPGMQSLEIDALLSEVPSFKKNVTQYEVEEGKPVTDSVRKMPITLSLECFVSNSPIRSLLDTAASFADGLLGGAQRNQEIYNLLLQLYEYDDEITVYTRYKTFEHMVITDITPARKPEDGDALIFTMELQEIRKAISSTTEVPKGMGVKPDTGKSSATDKATAQRAGVTKNAGQNTGVAGAAGSDSPTLLYQVTQGIKDFKIPGWN
Physico‐chemical
properties
protein length:228 AA
molecular weight: 24789,74430 Da
isoelectric point:4,93655
aromaticity:0,07456
hydropathy:-0,27105

Domains

Domains [InterPro]
DC_0628
STR
13–223
DC_0628
IPR048494
ATT
32–165
IPR048494
UJH95989.1
1 228
Architecture
STR
ATT
STR
STR 13-31 | ATT 32-165 | STR 166-223 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nafs113
[NCBI] 		2894291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95989.1 [NCBI]
Genbank nucleotide accession
OK570186.1 [NCBI]
CDS location
range 48118 -> 48804
strand +
CDS
ATGGCTATCCCAAATCTTGTAGGCTTCATCTGGAATGGTGCTTCAGACCGCACGTTTTCAGTTCAGGCCCCCGGCATGCAGTCACTGGAAATCGATGCGTTACTAAGCGAAGTTCCCAGCTTCAAAAAGAATGTGACGCAATACGAAGTGGAAGAAGGCAAGCCGGTGACAGACAGCGTGCGCAAGATGCCGATCACTCTGTCGCTGGAATGCTTCGTATCAAACAGCCCGATCCGCTCGCTGCTGGATACCGCAGCATCATTCGCTGATGGGCTTCTGGGTGGCGCACAACGCAATCAGGAAATTTATAACCTCCTGTTGCAGCTGTATGAATATGACGACGAAATCACGGTTTACACCCGTTATAAGACGTTTGAACACATGGTGATTACCGACATCACCCCCGCGCGAAAACCAGAAGATGGCGATGCCCTGATTTTCACTATGGAACTTCAGGAAATCAGGAAAGCGATCAGTAGCACAACCGAAGTTCCAAAAGGAATGGGCGTGAAGCCGGACACCGGGAAATCATCAGCGACGGATAAAGCAACCGCCCAGCGCGCTGGCGTGACCAAAAATGCCGGACAGAATACGGGCGTCGCAGGTGCCGCCGGTAGTGATTCGCCGACCCTGCTCTACCAGGTCACGCAGGGCATCAAAGACTTCAAAATCCCAGGGTGGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9db7788bb5c45ff52ea0add2932bcca51004944f6e25b297f9fc0ad24bd6f6c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nafs113 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank