Protein

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Genbank accession
YP_009788791.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVTTSYGRPIQGVSQQPDRIRLEGQCTLQENYIPDVVKGLTKRPSTYLVGKIADHGISAFSKFHSYDRGDESYFMCIEPMTNTVKVFNSNGEPQVVNGTTAYVGISEPWKQLDMRTIGDFTFITNKTVPVMMSSEKSPAQSTLGIVYCQYATYGKTYKIMADGAVIATYTTKDGGSASDITDVATDNVALKLYEQIHGDPTASPVIPANPTYDAELHDNVIYVTKRNGGDFKLTTSDSQKGEDLIAAKGSVKSVNQLPPIAPNGFVLRITGEGKSTKDDYWLKAEVSNESKIRWVESVQPNIPISFDATTMPHVLIRESISGGVATFTLKPADWDKRGVGGEYSNPIPSFIDEENPIPIQATGVFQNRLFFLSGEAWVASRSNLFFNFWRESTQAEVDTDPLDGYADTDRVNNLYQYQILNGSLAIFADQAQFIIDGSKPVTKANLTLQQVTAYPNNIHAQPQAGGENIFFAYDASGFTGIRELFTDNYTDTKKAYPITDYVSKYIEGQCTQLLASSNFNSMMVRTEANPSVVYVYDWLWQAEQKVQSAWHKWVFDGNVLFLFYLSDLMYIVYSKDNKTYVDYLHMVNDPSDYGLDYSIKLDHKVSVTAVYDHALKKYSIQLPYSRDDVVLTVGNGGYETMLGSAFVATHEGNGVWSTTERISDDKDLTVVCGVKYKSRYIPTQPVVKDARDRVIGLDSIIMSNMYVHYELSGFLEMLVKPKQGQERVYRFFGRWMGSANNLAGSPILDNGTYRAPIRQRAEDLQITIQSDSHYPLTIRDIEIDGTFHQRGQRI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 89117,07110 Da
isoelectric point:5,29361
aromaticity:0,11307
hydropathy:-0,34372

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
YP_009788791.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009788791.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9922
Central domain 138 336 200 0,2000
C-terminal 337 796 459 0,1992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-336
C-terminal
337-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP99
[NCBI] 		1932883 Uroviricota > Caudoviricetes > Autographivirales > Gajwadongvirus PP99 >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009788791.1 [NCBI]
Genbank nucleotide accession
NC_047802 [NCBI]
CDS location
range 27410 -> 29800
strand +
CDS
ATGGCCTATGTAACTACCAGCTATGGCAGGCCTATTCAAGGTGTGTCACAGCAACCTGACAGGATTAGGCTAGAGGGTCAATGCACCCTACAAGAGAACTACATACCTGACGTGGTTAAGGGTCTTACTAAGAGGCCATCAACCTATCTTGTAGGCAAGATAGCTGACCACGGCATTAGTGCTTTCTCTAAATTCCACTCATATGATAGGGGTGATGAATCCTACTTCATGTGCATTGAACCTATGACTAACACAGTCAAGGTATTTAACTCTAACGGCGAGCCTCAGGTTGTAAATGGCACTACTGCTTATGTAGGGATCTCAGAGCCTTGGAAGCAGTTGGACATGCGTACCATAGGTGACTTCACATTCATCACTAACAAGACAGTTCCTGTTATGATGTCAAGTGAGAAATCACCAGCTCAGTCAACACTTGGTATTGTTTACTGTCAGTATGCTACCTATGGTAAGACTTACAAGATAATGGCAGATGGAGCTGTAATTGCTACCTACACCACTAAAGATGGTGGCTCTGCATCTGATATTACAGATGTGGCAACTGATAACGTAGCATTGAAACTTTATGAGCAAATTCATGGCGACCCAACAGCAAGTCCTGTTATCCCTGCTAACCCTACATATGACGCTGAGTTACACGACAACGTTATCTATGTGACTAAGAGGAATGGTGGTGACTTCAAACTTACCACTAGTGACTCACAGAAGGGTGAAGACCTAATAGCTGCTAAGGGTTCTGTAAAATCTGTTAACCAACTACCACCTATTGCACCTAATGGGTTCGTACTTAGAATCACTGGTGAGGGTAAGTCAACTAAGGATGACTACTGGCTAAAAGCGGAAGTTAGTAACGAATCAAAGATAAGGTGGGTGGAGTCAGTACAGCCAAATATCCCAATATCTTTCGATGCCACAACCATGCCACATGTGCTTATTCGTGAGTCAATAAGTGGCGGTGTTGCTACCTTTACACTTAAGCCAGCTGATTGGGATAAGAGGGGAGTTGGTGGAGAGTATAGTAATCCGATACCAAGCTTTATTGATGAGGAGAATCCAATACCGATTCAGGCCACAGGTGTCTTCCAGAACAGGCTGTTCTTCTTGTCGGGTGAAGCTTGGGTAGCATCAAGGTCTAACCTTTTCTTTAACTTCTGGAGAGAGTCTACTCAGGCTGAGGTTGACACTGACCCACTTGATGGTTACGCAGATACTGACAGGGTTAACAACCTATACCAGTATCAGATACTTAATGGTTCACTAGCCATCTTTGCTGACCAAGCTCAATTCATAATTGACGGCTCCAAGCCAGTTACTAAGGCTAACCTGACCTTGCAGCAGGTCACTGCTTACCCAAACAACATACATGCTCAGCCACAAGCTGGGGGAGAGAATATCTTCTTTGCTTATGATGCAAGTGGGTTTACTGGTATCCGTGAGCTGTTCACCGATAACTACACAGATACTAAGAAAGCCTACCCAATCACTGACTATGTTAGTAAGTATATAGAAGGTCAATGCACACAGCTGCTTGCTTCATCTAACTTCAACTCTATGATGGTCAGGACAGAAGCGAATCCATCTGTTGTATATGTTTATGATTGGCTATGGCAAGCTGAGCAGAAGGTACAGAGTGCGTGGCACAAGTGGGTGTTTGATGGCAATGTCTTATTCTTGTTCTACCTGTCAGATTTAATGTACATTGTATACAGTAAGGATAATAAAACTTATGTAGACTACTTACATATGGTTAATGACCCGTCAGATTATGGCCTTGACTACTCCATTAAGCTAGATCACAAGGTTTCCGTAACTGCTGTATATGACCACGCGCTGAAGAAATACTCTATACAGCTACCTTACAGCAGGGATGATGTTGTCCTTACAGTTGGTAATGGTGGGTATGAAACCATGCTTGGCTCAGCATTTGTTGCCACCCATGAGGGTAATGGGGTTTGGTCAACTACTGAAAGAATATCTGATGATAAAGATCTTACAGTAGTTTGCGGAGTTAAATACAAGTCTAGGTACATACCTACACAGCCAGTTGTAAAGGATGCCCGTGATAGGGTGATAGGTCTTGATAGTATCATCATGAGCAATATGTATGTTCACTATGAGCTTTCTGGATTCTTGGAGATGCTAGTCAAACCTAAGCAGGGGCAAGAGCGTGTGTACAGATTCTTTGGTAGGTGGATGGGTTCTGCTAATAACTTAGCAGGCTCACCTATACTTGATAATGGAACTTACAGAGCACCAATAAGGCAGAGGGCAGAAGACTTGCAGATTACTATACAGTCTGATAGTCACTACCCTCTAACCATCCGTGATATAGAGATTGATGGCACATTCCATCAACGTGGACAACGCATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f0752bcf87f6741093d4269183c3f081af9a07c8e2dcfcbd295462451cb1b17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50