Protein

View in Explore
Genbank accession
QHR72234.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITMGDVLKAFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNTFSRNQNIQSDGNALRLRNQIANNAQYIEGVNLDGSARWWVGIGSNGEDAVSLYNSKYNSAVIVASNISVNKSLAITGQVQPSDFSNLDARYFTQTAANQRFAQLVGNNTFSGLNTFSNNVNVNSDGAAIILKNKTVNETLFILAKDSENNNLWYIGKGDVTSNITIYDYKGDTSIKLNASGVTFSKTVKITGQVQPSDWTNIDSRYIPAATLNNLPKLNVSNTFTNVQTIVSNNEGLVLKNLTQGQPQYIRGVDTANVSRWWVGVGGTNSTDVALNNSYSGTQITLGSSVIKANKSLDITGQVQPSDWTNLDARYFTRSASDSRYLRIRSTGFNNGNGEKWVKIATVVMPQSASTAVIEVFGGAGFNINTPQQAGKCEVVLRTSNNNPKGLNAVAWRTSDNVIITDIGYVNTSGDAYDIYCRVGPYQNNTTSRVQSSSNASVQLFEAPQTFDDAPQGIVKGTVAKYYTSLQKPTPSDIGAYTKDETDQKIAQAVSDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLSVGNLPSHTHSFSATTSSFDYGTKNTNTTGAHTHSVSGSTSSAGHHNHSISWIGQNSTHYSGGGGGSIGVGPGYTDAAGAHTHTISGTAASAGNHAHSVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:843 AA
molecular weight: 90153,40280 Da
isoelectric point:8,59352
aromaticity:0,08066
hydropathy:-0,36168

Domains

Domains [InterPro]
DC_0032
ATT
1–267
DC_0032 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR051934
G3DSA:6.20.80.10
STR
157–218
G3DSA:6.20.80.10 DC_1993 IPR048388 DC_2042
IPR048388
ATT
158–247
IPR048388 IPR048388 DC_0387
QHR72234.1
1 843
Architecture
ATT
ATT
STR
RBD
ATT 1-362 | ATT 382-467 | STR 468-735 | RBD 780-843
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR72234.1
1 843
Domain Start End Length (AA) Confidence
N-terminal 1 66 66 0,9900
Central domain 67 267 202 0,1367
C-terminal 268 843 575 0,7697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-66
Central
67-267
C-terminal
268-843

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage finno
[NCBI] 		2696395 Uroviricota > Caudoviricetes > Andersonviridae > Felixounavirus > Felixounavirus finno
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72234.1 [NCBI]
Genbank nucleotide accession
MN850619 [NCBI]
CDS location
range 65938 -> 68469
strand -
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATTGATACAATTCGTTCAGACGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTTGAAAGATTTGTTCAGATTGCTGGCAGTACTATGACGGGTGACTTAGGAATTGTCAAGTTACTTTATGGTGGTAAGGCGGTATTTGACCCTACAGGCTCTTCTGAGATTACTATGGGGGATGTTTTAAAGGCTTTTAAAATCAATGCAAACGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCTGCAACTGTTTACCACACTTTGAATAAGCCAAGTCCTAATGAGCTTGGAATGAGAACCAATGAAGAGAACGATGCAAGATATGCAAGGCTTGCTGTAACAAACACATTCTCTAGAAATCAGAACATTCAAAGTGATGGTAATGCACTTCGCCTTAGAAACCAGATTGCAAATAATGCACAATACATTGAGGGTGTAAACCTAGATGGTTCAGCTAGATGGTGGGTTGGTATTGGTAGCAATGGCGAGGATGCAGTAAGCCTGTATAACAGCAAATACAACTCAGCAGTGATTGTTGCAAGCAATATCTCTGTTAATAAATCTTTAGCAATCACTGGTCAAGTTCAGCCTTCTGACTTCTCTAACTTAGATGCTAGATACTTTACTCAGACAGCAGCTAATCAGAGATTTGCGCAGCTAGTTGGTAATAACACCTTCAGTGGTTTAAACACATTCAGTAATAATGTCAATGTGAACTCTGATGGTGCTGCTATCATTCTAAAAAATAAAACGGTCAATGAGACTCTGTTCATCCTAGCAAAGGACAGTGAAAACAATAATTTGTGGTATATTGGTAAAGGTGATGTAACCTCTAATATCACAATTTATGATTACAAGGGGGACACTTCCATTAAATTAAACGCGTCTGGTGTAACATTTAGTAAGACTGTCAAAATCACTGGTCAAGTACAACCTTCTGACTGGACTAACATTGATTCTAGATACATTCCAGCAGCTACTTTGAATAATCTTCCTAAACTTAATGTGTCTAATACTTTCACAAATGTGCAAACTATTGTATCTAACAATGAGGGTTTGGTATTAAAGAACTTGACACAGGGGCAGCCGCAATATATCCGTGGTGTGGATACTGCGAACGTATCTAGGTGGTGGGTAGGTGTAGGTGGAACAAATTCTACTGATGTAGCCTTAAACAACAGCTACTCTGGTACTCAAATTACTCTTGGGTCGTCAGTAATTAAGGCTAATAAGAGTTTAGACATTACTGGTCAAGTACAACCTTCTGACTGGACTAACTTAGATGCTAGATATTTCACTCGAAGTGCTAGTGATAGCAGATACCTGAGAATCAGAAGTACTGGCTTCAATAATGGAAACGGTGAAAAATGGGTTAAAATTGCTACTGTTGTAATGCCGCAATCCGCATCTACTGCGGTGATTGAAGTGTTTGGTGGGGCAGGTTTTAATATCAATACACCACAACAAGCAGGTAAGTGTGAGGTTGTTTTACGAACATCAAATAACAATCCAAAAGGTTTAAATGCCGTGGCTTGGAGAACATCAGATAATGTCATCATCACTGATATCGGTTATGTTAATACATCTGGCGATGCTTATGACATTTACTGTAGAGTTGGTCCATACCAAAACAACACAACATCAAGAGTTCAATCTTCTAGTAATGCAAGTGTACAGTTGTTTGAAGCTCCACAGACATTTGATGATGCACCACAAGGTATTGTGAAGGGTACAGTTGCAAAATACTACACTAGTTTGCAAAAACCAACCCCTTCAGATATTGGTGCATACACTAAAGATGAAACTGACCAGAAGATTGCACAGGCAGTAAGTGACTCTACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTAACCCTAATACAGCACTGCCTGGTCTAACTTGGACGTATCTGAATAATGGTGTTGGTAGAACTATTAGAATTGCAGCAGCAAATGGTTCAGATGTTGCTACAACTGGTGGTTCAGATTCTGTAACGTTATCTGTTGGTAACTTACCTTCACACACGCACAGTTTTTCTGCGACTACCTCATCGTTTGACTACGGAACAAAAAACACTAACACGACTGGTGCTCACACACACTCTGTAAGTGGCTCTACTTCATCTGCTGGTCACCACAACCACTCTATTTCATGGATTGGTCAGAACTCTACCCACTACTCTGGTGGTGGTGGTGGTAGTATTGGTGTAGGACCGGGTTACACTGATGCTGCTGGTGCTCACACCCACACAATCTCTGGTACTGCTGCTTCTGCTGGTAACCATGCTCACAGTGTTGGTATTGGTGCTCACAGCCATACAGTTAGCGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTATAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11c3c32b8470d2728b475a8ab7eb6e3ad052e0eb18f5c31055dc19537dd9e25c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank