Protein

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Genbank accession
WMX18256.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MYKCFSSGGGSNIANKPTSDGNFVLEVLSLRKISDTDWTCKQTFTTKGNVEGTYVRYCQNGSWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEWQSVAFGVLNVNGVSNADPAITFKNGAMVREAQGGGLGALILSASASATDSAKYIAFRPFGDSSGTEIRVKANVYNEPSLEWSYGAGVRSSAVGAFVIYAKTGQALHLRPNGDNSNQATVIDQNGKMTVGGEFEAQNSKITGNLSVSEDNRMIVLGKNTDIGLVKKSGMSGKMAISKSNSFTIMVSTNTNNQINPADTFNDIFKVDADGNQTVYGNAQINRQLTVSSAATVNGVINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLTITGDQLKTTSLWVTGDAAVNGVLTVDGRARFNQEFIVSTSVNVQNTGNSHLVFRKADGTEKGLIWADEPGSVSIRAGGVSGPTWNFWNSGSCQFPGAISNYNGISSTTNYPAGQPIGTYNNTSGLVTRFSNGAYASLYFQEYVGNYHQAILNVNGFGRDDNFYFRAGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEILPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKNLKAEIEELKSK
Physico‐chemical
properties
protein length:677 AA
molecular weight: 71969,94070 Da
isoelectric point:5,68739
aromaticity:0,08124
hydropathy:-0,29158

Domains

Domains [InterPro]
cd19958
STR
2–69
cd19958 DC_0246
DC_0246
RBD
8–305
DC_0246 IPR030392 Coil
IPR030392
CHP
577–671
IPR030392
WMX18256.1
1 677
Architecture
STR
RBD
STR 2-69 | RBD 70-677
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMX18256.1
1 677
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,1551
Central domain 256 454 200 0,4115
C-terminal 455 677 222 0,8578
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-454
C-terminal
455-677

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KpF2
[NCBI] 		3073024 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMX18256.1 [NCBI]
Genbank nucleotide accession
OR234023.1 [NCBI]
CDS location
range 172667 -> 174700
strand -
CDS
ATGTATAAATGCTTCTCATCTGGTGGTGGTTCTAATATAGCTAATAAACCTACCTCTGATGGCAACTTTGTTCTTGAAGTTTTATCTTTGCGTAAAATTTCTGATACTGATTGGACGTGTAAGCAGACCTTTACTACAAAAGGTAATGTTGAAGGTACATATGTTCGATACTGCCAAAACGGCTCATGGTCTGCATGGAAAGAAGTTGTTGCTGGCGTCCAACCAATTAATTTAGGTGGTACTGGTGCAACTTCTGTAGCTGCCGCTCGTAATAACCTCGGTGTTGGTGAATGGCAATCTGTGGCATTTGGTGTATTGAATGTCAACGGCGTTAGTAATGCAGACCCGGCCATCACATTTAAAAATGGGGCTATGGTTCGTGAAGCACAAGGTGGTGGTCTCGGTGCGTTAATCCTGTCAGCTTCTGCTTCTGCTACAGATTCGGCTAAATATATTGCTTTTCGACCCTTCGGTGATTCGTCTGGTACTGAGATTAGAGTAAAAGCCAACGTGTACAACGAGCCTTCGCTTGAATGGTCTTATGGCGCTGGCGTTCGTTCATCCGCTGTAGGTGCTTTTGTGATTTATGCAAAAACAGGTCAGGCACTCCATTTAAGACCAAACGGTGATAATTCTAACCAAGCCACAGTTATTGACCAAAACGGTAAAATGACAGTCGGTGGTGAGTTCGAGGCCCAGAACTCGAAAATCACAGGCAACTTGAGCGTTTCCGAAGATAACAGAATGATCGTTCTTGGCAAAAACACCGATATCGGTTTAGTCAAGAAAAGTGGTATGTCAGGAAAAATGGCTATTAGTAAATCTAACTCGTTTACTATTATGGTATCAACAAATACCAACAACCAAATTAATCCTGCTGATACGTTTAATGATATATTCAAAGTAGATGCTGATGGAAACCAGACTGTTTACGGAAATGCCCAGATTAACAGACAGCTAACAGTTTCTAGTGCAGCGACTGTTAATGGTGTTATTAATGCTAACGGCGGTATTATTGTTCCTACTACCAAGTATGTACAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGCGACACGTATCTTCCGTTAGCAGGTGGTACTGTAACTGGGCGGTTAACAATTACAGGCGATCAGTTAAAAACTACATCACTTTGGGTTACGGGAGACGCTGCTGTTAATGGTGTTTTAACTGTTGATGGAAGGGCTAGATTTAATCAAGAGTTCATTGTATCAACTTCGGTTAACGTCCAGAACACTGGTAACAGTCATTTGGTCTTCCGTAAAGCTGATGGTACAGAAAAAGGACTTATTTGGGCTGATGAGCCTGGTAGCGTTAGTATAAGAGCAGGTGGTGTCTCTGGGCCAACGTGGAACTTCTGGAACAGCGGTTCTTGCCAATTCCCAGGTGCTATTAGTAACTATAACGGAATTAGCAGCACTACTAATTATCCTGCAGGACAACCCATTGGCACATATAACAATACCTCAGGATTAGTAACTAGATTTAGTAATGGTGCTTATGCTTCGTTATATTTCCAAGAGTATGTAGGAAATTATCACCAGGCTATTCTTAATGTTAATGGATTTGGTCGAGATGACAATTTCTATTTCAGAGCTGGCGGTGACTTCTTCTGTACTCGTAACGGTTCTTTTGATAACGTTGAGATTCGTTCTGACCGTAGAGCCAAATCGGATATCAAAGTTATTGAAAATGCTTTAGAAAAGGTTGAAACATTATCTGGTAATACTTATGAACTTCATAACACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAGGAAGTTCAAGAAATCTTACCGGAAGCAGTTACTCAAGATAATGAAGAAGATGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCACTTCTCGTTGAATCTGTTAAAGAGCTTTCTGCCGAAGTTAAAAATCTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18040c86307255005146f3db7648ec9b7fe7cf6bd1d5488d0463cc938e3a5921
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6469
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Klebsiella phage KpF2 from hospital wastewater Salih Dogan,H., Karaynir,A., Altunay,B. and Bozdogan,B. 2020 — GenBank