Protein

View in Explore
Genbank accession
QBX23884.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSDVKTKKGTSIQNDGLFATKPIITLNLSSPTKEIRLLHVESQKYIRLIGTYTTDEIKIDMATGKITQNGRNILGDLDMVNSRYFELLPGKNTLQCDNATITTDFREVYL
Physico‐chemical
properties
protein length:110 AA
molecular weight: 12399,08870 Da
isoelectric point:7,82255
aromaticity:0,06364
hydropathy:-0,34818

Domains

Domains [InterPro]
DC_1533
STR
1–109
DC_1533
G3DSA:2.60.120.860
RBD
3–104
G3DSA:2.60.120.860
IPR054738
RBD
15–109
IPR054738
QBX23884.1
1 110
Architecture
STR
STR 1-109 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan166
[NCBI] 		2548017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23884.1 [NCBI]
Genbank nucleotide accession
MK448858.1 [NCBI]
CDS location
range 35084 -> 35416
strand +
CDS
ATGTCTGATGTAAAAACTAAAAAAGGAACATCTATCCAAAATGATGGGCTATTCGCCACAAAACCTATCATCACTCTCAATCTATCATCACCAACAAAAGAAATCAGGCTGCTACATGTCGAAAGTCAAAAGTATATCAGATTGATTGGGACTTATACCACTGATGAAATCAAGATTGATATGGCCACGGGTAAAATTACCCAGAACGGCCGCAACATCCTTGGCGATTTAGATATGGTTAACAGTCGCTATTTTGAGCTACTGCCTGGTAAAAATACTTTGCAGTGTGACAATGCCACCATAACCACAGACTTTAGGGAGGTTTATCTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c30e7eedc0540bde550ad61abd254ec18cd744ab4858ebf336015eeed784072
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank