Protein

View in Explore
Genbank accession
QBP06135.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNNSFFFNPGATDTAIAGNSLRWRNAQRLYHDPSSTGSNTTWTLSLWFKRGDIDTGDYNPHICCAGDSASSLPRIDFAFLNPAATAAGDALSLAYNPDNAGWHYLVTERLFRDPAAWYHIVIVADTSNATAADRLRLYVNGERNTTWGSTDYPNQNDNLVFCSGAYRGIGTYDIPASTPTYTDGYFAEIHCLDGTAVTDATDFGQYNAAGVWVPKTVSGVTYGTTGFYLDFSNSDNIGEDFSGNNNDFTSSGFELGDITSEDYDWMLDHPKKNYTVGNEPSERDNDVYSDGNLSLNLNNTRTSSGTIQVSSGKHYWEWEMTTLGTGIVGIADASNMRWDGQDEDFTNSTYQGYGIDDGGNWYHNGSFGSFGANWYDMGVGVILGFTLDLDLGQLSVSVNGVDQGIMFSNIDTTKSWVPAVRGNPSSLLQGAWNFGQRPFAYPPGEVSSTTAFKTVLYTGNASNNVITGVGFAPDLLWLKDRSAARQHNIFDSVRGGIGRLRPSDTDAEHTAPDGFVSLDSDGFTLDGAASGGDSNVNGGQYVAWCFNAGTGSAASNTDGTITSTVKASPENGFSVVTYTGSSSNFTFGHGLNAEPSFIAIKNRSASANWFVLTKATGSWTYGHLNLGDALTSAVQTADSTIVDLKNAAFNWFNAAGDNFVAYCFADAGGKVKTGSYTGNGSTSGPYVDLGFKPAMVLIKGTSASRGWYMYDTTRSPSNPADNYIQAHVSDAESTSLGIDIDLLNTGFSLKSSSGYVNGSSETYIYIAFAENFTEGTQKPTTKFNTLTYTGDGTNTRSFTGLGFNPDLVWIKQRTNAGFHVLGDSVRGSNGTNGLNLNTNSTGFEGDENSGYVKTWDADGFSIEGSSGATYPIANVNNSGESYIAWCWNAGTGSAASNTDGTITSTVKADSSAGFSIVTYTGNVTAGATVGHGLSSTPSMVIIKCRNGSRDWTVYHKSVGGTGCLELNSANAANTDYAFFNDTDPTDTVFTLGNDAQVNASGDTYVAYCFADTDGAVKTGSYVGTGNTTQVPMIECGFRPAFVMVKSSSSGATAWEIIDNKRGGKGRLFAESSAAESTADSIQFTDTGFHPLSTDGNINSSGFTYIYIAFAQEFDPDTIAREISTEYLPAVDITNPSEHFTTILDTGANILTSAQATFPNGLWWIKDRANSNQHQLVDSTRGGNAITCPQIALPLPYVAPAGNSVAWCWSAPTSYTNPTSSTTGRINVDAGFAILNASISAGTFTVPHGLSAAPEFLIAVGSSNSATQRNVWHKSIAASEALYLNGTGAKVSAPNLWASTAPTSTEITLGSDWASSGATTVGIYAWHSVPGYSAIGSYVGNGSTDGPFIQTGFRPGWIMVKQTSPSVGSWQIWDTQVNQYNPTNGRFNADRDLAEQGSLPIDIVSNGFKVRHTDGSTNESGYNFIYAAFAEHPMGGSNVSPAPAR
Physico‐chemical
properties
protein length:1444 AA
molecular weight: 153449,26940 Da
isoelectric point:4,59062
aromaticity:0,11565
hydropathy:-0,30090

Domains

Domains [InterPro]
IPR013320
STR
31–188
IPR013320 DC_1713 IPR055906 IPR055906
IPR001870
STR
245–439
IPR001870 IPR055906
IPR043136
STR
279–459
IPR043136
IPR013320
STR
289–443
IPR013320
cd11709
STR
312–420
cd11709
QBP06135.1
1 1444
Architecture
STR
STR
STR
STR
STR 31-188 | STR 203-771 | STR 778-1111 | STR 1201-1432 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP06135.1
1 1444
Domain Start End Length (AA) Confidence
N-terminal 1 247 247 0,0008
Central domain 248 446 200 0,1758
C-terminal 447 1444 997 0,9939
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-247
Central
248-446
C-terminal
447-1444

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B68
[NCBI] 		2545437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP06135.1 [NCBI]
Genbank nucleotide accession
MK016664 [NCBI]
CDS location
range 80203 -> 84537
strand +
CDS
ATGAATAACAGTTTCTTTTTCAACCCCGGCGCAACTGATACTGCGATTGCGGGTAACAGTCTGAGGTGGCGGAACGCTCAGCGTCTCTACCACGACCCCTCTAGCACTGGTAGTAATACCACTTGGACTCTAAGCCTGTGGTTCAAGCGCGGTGATATCGATACTGGCGACTACAACCCCCACATCTGTTGTGCGGGTGATAGTGCCTCTTCGCTGCCTCGTATTGATTTTGCGTTCCTAAACCCGGCAGCTACAGCAGCTGGAGATGCACTAAGTCTTGCATATAATCCAGATAACGCCGGGTGGCACTACTTGGTAACCGAGAGGTTGTTCCGTGACCCTGCTGCTTGGTATCATATAGTGATCGTTGCAGATACATCCAATGCAACGGCTGCCGATCGTCTGCGGTTATATGTGAATGGTGAGCGTAATACCACCTGGGGTTCTACAGATTATCCCAACCAGAACGACAATTTGGTCTTCTGCTCTGGGGCATATCGTGGTATCGGCACTTACGACATCCCAGCTTCCACCCCCACATACACGGATGGGTATTTTGCTGAGATTCATTGCCTGGACGGCACTGCCGTAACTGACGCCACTGACTTCGGCCAGTACAACGCTGCTGGCGTGTGGGTGCCCAAGACCGTCTCTGGTGTCACCTACGGTACGACTGGATTCTATCTCGATTTCTCGAATTCCGATAACATCGGTGAGGACTTCTCCGGTAACAACAACGACTTCACTTCGTCTGGTTTCGAACTGGGTGACATCACTTCCGAAGATTACGACTGGATGTTGGACCACCCCAAGAAGAACTACACTGTAGGTAACGAACCATCCGAGCGCGACAACGACGTCTACTCCGACGGTAACCTCAGCCTCAACCTGAACAACACCCGTACCTCCTCCGGTACGATTCAGGTCAGTTCCGGTAAGCACTACTGGGAGTGGGAGATGACCACTCTGGGTACCGGTATTGTTGGTATCGCAGACGCAAGTAATATGCGTTGGGATGGTCAAGATGAAGACTTCACCAACTCTACCTATCAGGGATATGGTATTGATGACGGTGGTAACTGGTATCACAATGGAAGTTTCGGATCTTTCGGTGCTAACTGGTACGACATGGGCGTCGGAGTAATCCTAGGGTTTACCCTAGACCTGGATCTTGGACAGTTGTCAGTTTCCGTCAACGGAGTAGACCAGGGTATCATGTTCAGTAACATCGATACCACTAAGAGTTGGGTCCCTGCTGTGCGCGGTAACCCCTCCTCCCTACTTCAGGGTGCCTGGAACTTCGGACAACGCCCCTTCGCCTACCCACCCGGAGAGGTATCGTCAACGACGGCGTTCAAAACGGTGCTCTATACGGGCAATGCCTCGAACAACGTCATCACAGGCGTAGGTTTCGCCCCAGATCTACTATGGTTGAAGGACAGGAGTGCTGCAAGACAACACAACATTTTTGATAGTGTGCGTGGCGGGATCGGCAGGCTACGCCCAAGCGATACCGACGCAGAACACACTGCCCCTGATGGGTTTGTAAGTCTTGATTCTGATGGATTCACCCTAGATGGTGCCGCCAGCGGTGGTGATAGCAACGTGAACGGAGGACAATACGTCGCCTGGTGCTTCAACGCCGGTACTGGTTCCGCTGCATCCAACACCGACGGTACGATCACTTCTACGGTCAAGGCGAGTCCTGAGAATGGGTTCTCTGTGGTGACCTATACAGGCAGTAGCTCTAATTTCACCTTTGGTCACGGTCTAAACGCTGAACCTTCCTTTATCGCGATTAAAAACCGGTCGGCAAGCGCAAACTGGTTTGTGCTTACAAAAGCAACTGGTTCTTGGACGTATGGACATCTTAACCTTGGAGATGCGCTCACCTCTGCTGTTCAAACAGCAGACTCAACTATAGTCGATTTGAAAAACGCAGCGTTTAATTGGTTTAACGCAGCTGGCGACAATTTTGTAGCCTACTGCTTCGCCGACGCCGGAGGTAAGGTGAAGACTGGTTCGTACACGGGCAACGGATCTACCTCAGGACCCTACGTTGATCTGGGATTCAAGCCCGCGATGGTGCTGATCAAGGGAACCAGCGCCTCTAGGGGGTGGTACATGTATGACACTACTCGTAGCCCCTCTAACCCAGCAGATAACTACATACAAGCCCACGTCTCTGATGCAGAGTCAACTTCCCTGGGAATCGACATTGACTTACTCAACACCGGATTCAGTCTGAAAAGTTCCAGTGGTTATGTGAACGGATCTAGTGAGACCTACATCTACATCGCCTTCGCAGAGAACTTCACCGAGGGTACCCAGAAACCCACCACGAAGTTTAACACCTTGACGTACACAGGTGACGGTACGAACACCAGGTCATTCACCGGCCTCGGTTTCAACCCGGACCTCGTCTGGATTAAGCAACGGACGAATGCCGGATTCCACGTCCTTGGTGACTCTGTTCGTGGGTCCAATGGTACCAATGGTCTAAACCTGAACACGAACTCAACTGGCTTTGAGGGAGATGAGAACAGTGGGTATGTTAAGACCTGGGATGCTGATGGATTCTCTATTGAAGGATCTAGTGGTGCTACCTATCCTATAGCAAACGTCAACAATAGTGGCGAATCCTACATCGCCTGGTGCTGGAACGCCGGAACTGGTTCCGCTGCGTCCAACACCGACGGTACGATCACTTCTACTGTCAAGGCAGATTCCTCCGCGGGTTTCTCCATTGTGACCTACACGGGTAACGTGACTGCCGGAGCAACCGTGGGCCATGGATTATCCAGTACCCCAAGCATGGTGATCATTAAGTGCCGCAACGGATCCCGTGACTGGACTGTTTATCACAAATCCGTTGGTGGTACCGGATGCCTGGAGTTGAATTCAGCAAATGCTGCGAACACAGACTATGCCTTCTTCAACGATACCGATCCCACCGACACCGTCTTCACCTTAGGTAACGACGCCCAGGTAAATGCCTCGGGTGATACCTACGTCGCCTACTGCTTCGCCGACACCGACGGTGCAGTGAAGACCGGGTCGTATGTTGGAACCGGTAACACAACTCAAGTCCCAATGATCGAGTGTGGGTTCAGGCCTGCATTTGTGATGGTTAAGTCCTCGTCCAGCGGCGCCACGGCCTGGGAGATTATCGATAACAAGCGTGGAGGAAAGGGACGGTTGTTTGCAGAGTCATCTGCGGCAGAATCCACGGCAGATTCCATTCAATTCACCGACACTGGGTTCCATCCACTGTCCACTGACGGTAACATTAACTCTAGTGGTTTCACCTACATCTACATTGCCTTCGCTCAGGAGTTCGACCCCGATACAATCGCTAGGGAGATCAGCACCGAGTATCTGCCCGCTGTTGATATCACCAATCCTAGTGAGCACTTCACCACGATCCTGGACACTGGGGCGAACATCCTGACCAGTGCACAGGCGACGTTCCCGAACGGGCTGTGGTGGATCAAGGACCGCGCCAACAGCAACCAGCACCAGCTGGTGGACTCAACACGAGGAGGGAATGCAATCACCTGCCCGCAAATTGCTCTGCCTTTGCCGTATGTAGCTCCCGCTGGCAATTCGGTTGCCTGGTGCTGGAGCGCCCCAACCAGCTACACAAACCCAACGAGTAGCACGACTGGGCGCATCAATGTGGACGCAGGTTTTGCAATCCTCAATGCCAGCATTTCAGCGGGTACTTTTACGGTTCCACACGGATTAAGTGCTGCTCCTGAGTTCTTGATTGCCGTTGGCTCGTCTAACTCTGCCACACAGCGGAACGTATGGCATAAAAGCATTGCCGCGTCAGAGGCGTTGTACCTGAACGGCACCGGTGCCAAAGTTTCCGCACCAAACCTATGGGCATCAACGGCGCCAACCAGCACAGAGATAACACTTGGTTCTGACTGGGCATCTAGCGGAGCAACAACAGTCGGCATCTACGCCTGGCACTCGGTCCCTGGGTATAGCGCCATAGGCTCGTATGTTGGGAATGGGTCCACAGATGGCCCCTTCATCCAGACAGGGTTCCGGCCTGGTTGGATCATGGTCAAGCAGACCTCACCCAGTGTTGGTAGTTGGCAGATCTGGGATACACAGGTCAACCAGTACAACCCAACCAATGGTCGTTTCAATGCGGACAGGGATTTGGCTGAGCAAGGGTCACTCCCAATTGACATCGTGTCTAACGGCTTCAAGGTGCGCCACACCGATGGATCGACTAACGAGTCTGGTTACAACTTCATCTACGCCGCCTTCGCGGAGCACCCCATGGGTGGTAGCAATGTCTCTCCAGCACCCGCTCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
091841d00836761531695908f93f487365fd96dbe2ac71283bdc03ab2ce456ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank