Protein

View in Explore
Genbank accession
QQO90994.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MLRPKLDRVWTSNNANLRRDPGDAKYLQGWIAEIPTFQVLNYLQYKVDTTLLALAERGVFEWGTDVQYGLGSLVWDDATKTIYVATVGAPSRTLRPSQNLGQWAASSIQVSRYDYDDIAGKISAHIADVTTNPHKITANMIGAYNKSQIDNLIAQYNALVASHANDRNNPHQVTAAQAGAVPVTGGTYAGAVTFQQGMLFDAGGTTKLAFGAQGLYMQSVNTRIGIDSSGVPVVGNVATGINSRIITDASFAEAKAREEPNYSIPYPNYSQHLIGDFNMNIGSGEFTAPDSWQFGPQFGSSLYVPAQTPTATALQTTNIPYSTSVTTLCMDILSNSPRIPTSSAVMFEIGFRAASGSFVHIQLLENGQVYGRRRDNGVASPTIESTRSLLPAQVNNWYRIVATFSDTGIRLYFDGVLVANTTASTTKGAVVEFARMDIMSSARNIAIRNFRMWDSALTDKQISTL
Physico‐chemical
properties
protein length:465 AA
molecular weight: 50477,06740 Da
isoelectric point:6,60284
aromaticity:0,09462
hydropathy:-0,15011

Domains

Domains [InterPro]
DC_0782
STR
6–463
DC_0782
G3DSA:2.60.120.200
STR
274–465
G3DSA:2.60.120.200
IPR013320
STR
319–465
IPR013320
PF13385
LEC
341–463
PF13385
QQO90994.1
1 465
Architecture
STR
STR 6-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps23T
[NCBI] 		2801356 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps23T
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO90994.1 [NCBI]
Genbank nucleotide accession
MW147598.1 [NCBI]
CDS location
range 46684 -> 48081
strand +
CDS
ATGTTAAGACCAAAACTTGATAGGGTTTGGACTTCGAACAACGCCAACTTAAGGCGTGACCCAGGAGATGCCAAGTATCTCCAAGGTTGGATTGCAGAAATCCCAACGTTCCAAGTTCTAAACTATTTGCAATACAAAGTTGACACTACCCTATTGGCATTGGCTGAACGTGGTGTCTTCGAATGGGGAACTGACGTCCAATACGGATTAGGTTCCTTAGTGTGGGACGATGCAACTAAGACTATTTATGTTGCAACTGTTGGTGCCCCAAGTCGCACCCTTCGTCCGAGTCAGAACTTAGGACAGTGGGCTGCGAGTTCCATTCAAGTTTCTCGTTACGATTATGATGACATTGCTGGTAAGATTTCTGCACACATTGCAGACGTCACTACAAACCCTCATAAGATAACGGCCAACATGATTGGGGCATATAACAAATCACAGATTGATAACCTGATTGCTCAGTATAATGCCTTGGTTGCAAGCCACGCAAATGACCGTAACAACCCGCACCAGGTAACTGCTGCACAAGCTGGTGCTGTCCCAGTAACAGGTGGAACATATGCTGGTGCAGTAACATTCCAACAAGGTATGTTGTTTGATGCAGGTGGAACAACCAAGTTAGCATTTGGTGCTCAGGGTCTCTACATGCAGTCTGTAAATACCCGGATTGGTATTGACTCAAGCGGTGTTCCTGTTGTCGGCAATGTTGCAACTGGTATTAACTCCAGAATCATTACTGATGCTTCGTTTGCAGAGGCTAAGGCTCGTGAAGAACCAAACTACTCTATACCGTACCCAAACTACTCCCAGCACCTGATTGGTGACTTCAACATGAACATAGGTTCTGGCGAGTTTACTGCCCCAGACAGTTGGCAGTTTGGGCCGCAGTTTGGTTCCTCTTTATATGTGCCAGCCCAAACACCAACGGCCACTGCACTACAGACTACCAATATACCATACTCAACCAGCGTTACTACACTGTGTATGGATATACTATCTAACTCACCAAGGATTCCAACATCTTCTGCTGTAATGTTTGAGATTGGATTCCGTGCTGCATCTGGAAGTTTCGTACACATACAGCTGTTAGAAAATGGTCAAGTATATGGACGCAGAAGGGATAATGGTGTCGCGTCCCCGACGATTGAGAGTACAAGGTCACTTCTCCCTGCTCAGGTTAATAACTGGTACAGGATTGTTGCCACATTCTCTGACACAGGAATACGTCTATATTTCGACGGTGTGCTAGTAGCTAACACAACAGCATCAACAACAAAGGGTGCAGTAGTTGAATTCGCCAGAATGGATATAATGTCCTCTGCCAGAAACATTGCTATTAGAAACTTTCGTATGTGGGACTCTGCTCTTACAGACAAACAAATCTCAACTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2b17015465f5d24718d96670efe3961c74b710d4985118f14643ba232b4fa25
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank