Protein

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Genbank accession
BAO58477.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MRLTIAKKPVTISGTYLVKRAEKLAQSLGNLPMKYATKVEIIDGYIVRGVRSNMLGTAMVLDTEAYVVVCGNPYNGTSRAQTHHPLIRLPLGRDSFLKPLKQPPEQIVVQELLPSHMGTRGYRVMELGTFSQSVATGSLVRPSAFALPDYGIIHLENYLNMPQVFDVNPFAFVSRADTFFYDMPVLAPSFMRATYTANAETGTGWIESDGNYPGEDAPKTQPWSMRVSDSIMLDANNVMPFSKRVNPPPYDPTSPAATTFNNAQYPWSRGLTIGHGNDEDIGLFYRVLLVAHAVFDMVDDEDRYGARGLWIASLQIQQDGTALLVGSSVIDSRQEADQYRRPWKIINGDSERYMANSHFPSGLALLDTGDSVLFDSFSINQTDPPSDPNGGISTPYWSVDCAWVNQFGTIVRRETVAGPTKGTIDTFSGVPHDMQYIYGADSDGTNAVCVFFSSDFIHDPNGNIGPNVSIDIVVATKDGVSIPFSQMVPFRPCNWFRNSMYGNILHIGAGKFLFPVTSEFQENEDIGFIDGNMAMAVYDVNKNTLELAGVVEEELKNGVRDWYYTGLMDAPVKQVVDENTEEVLIDATVLFSIGGKAQFAGEPGPEHGFTYISYDSGATWDKIANYGSASGARYCGTMIAPRIKDIQGI
Physico‐chemical
properties
protein length:649 AA
molecular weight: 71401,67240 Da
isoelectric point:4,85981
aromaticity:0,10632
hydropathy:-0,18983

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAO58477.1
1 649
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,4950
Central domain 119 317 200 0,7982
C-terminal 318 649 331 0,6023
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-317
C-terminal
318-649

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage KPP25
[NCBI] 		1462608 Uroviricota > Caudoviricetes > Kochitakasuvirus >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAO58477.1 [NCBI]
Genbank nucleotide accession
AB910393 [NCBI]
CDS location
range 5903 -> 7852
strand -
CDS
ATGCGCCTGACCATTGCAAAGAAGCCGGTTACGATTTCCGGCACCTACCTCGTGAAGCGCGCCGAGAAACTGGCCCAGTCTCTCGGCAACCTCCCCATGAAGTACGCCACCAAGGTCGAGATCATCGACGGGTATATTGTTCGCGGCGTGCGCAGCAACATGCTCGGCACCGCTATGGTGCTCGACACCGAAGCCTACGTCGTGGTGTGCGGTAACCCGTACAACGGCACGTCCCGCGCGCAGACTCACCATCCGCTGATCCGCCTCCCGCTCGGAAGGGATTCGTTCCTCAAGCCCTTGAAGCAACCGCCGGAGCAAATCGTGGTGCAGGAGCTGCTACCTAGCCACATGGGGACGCGCGGCTACAGAGTGATGGAGCTGGGGACGTTCTCGCAGAGCGTCGCCACCGGCAGCCTTGTACGGCCGAGCGCGTTCGCGTTGCCTGACTACGGGATCATTCACCTCGAAAACTACCTGAACATGCCGCAGGTCTTTGACGTGAACCCGTTCGCGTTCGTGTCGCGCGCGGACACGTTCTTCTACGACATGCCTGTACTTGCGCCGTCGTTCATGCGTGCCACGTACACCGCCAACGCCGAAACGGGAACTGGGTGGATCGAGTCGGACGGCAACTACCCCGGCGAGGATGCGCCGAAGACACAGCCGTGGTCCATGCGTGTCTCTGACTCGATCATGCTCGACGCGAACAACGTGATGCCGTTCAGCAAACGCGTGAACCCACCGCCGTATGACCCTACCAGCCCGGCGGCCACCACGTTCAACAACGCGCAGTATCCGTGGTCCCGCGGCCTCACGATCGGGCATGGGAACGACGAAGACATCGGCTTGTTCTACCGTGTACTGCTGGTGGCGCACGCTGTCTTCGACATGGTTGACGATGAAGATCGATACGGCGCGCGCGGCTTGTGGATCGCCAGCTTGCAGATCCAGCAGGATGGCACGGCGCTGCTCGTCGGTAGCAGCGTGATCGATTCCAGGCAGGAAGCTGATCAGTACCGCCGTCCGTGGAAGATCATCAACGGGGATTCCGAACGCTACATGGCGAACTCGCATTTCCCGTCCGGCTTGGCGCTGCTCGACACAGGTGACAGCGTGCTGTTCGATTCCTTCAGCATCAACCAGACCGATCCGCCGAGCGATCCGAATGGCGGGATCAGTACGCCGTATTGGTCTGTAGACTGCGCCTGGGTGAACCAGTTCGGCACCATCGTTCGAAGGGAAACGGTGGCCGGGCCGACCAAGGGAACTATCGATACGTTCTCTGGTGTACCGCACGACATGCAGTACATCTACGGAGCTGATTCGGACGGCACGAATGCCGTGTGCGTGTTTTTCAGTAGCGACTTCATCCATGACCCGAACGGGAACATCGGACCGAACGTGAGTATCGACATCGTGGTGGCGACCAAGGACGGCGTGAGTATTCCGTTCAGCCAGATGGTCCCGTTCCGCCCGTGCAACTGGTTCCGTAACTCCATGTACGGGAACATCCTGCACATAGGCGCGGGGAAATTCCTGTTCCCGGTGACTTCGGAATTCCAGGAAAACGAGGACATCGGTTTCATCGACGGGAACATGGCGATGGCTGTATACGACGTGAACAAGAACACCTTGGAACTGGCCGGCGTAGTCGAAGAGGAATTGAAAAACGGCGTGCGTGACTGGTACTACACTGGGCTGATGGACGCGCCAGTGAAGCAAGTCGTCGACGAGAACACTGAAGAGGTACTGATTGACGCTACGGTGCTGTTCTCCATCGGCGGGAAAGCACAATTTGCCGGGGAGCCTGGACCTGAACACGGCTTCACCTACATCAGCTACGACTCGGGGGCGACTTGGGATAAGATCGCCAACTACGGCTCAGCGTCTGGTGCTCGGTACTGCGGAACGATGATCGCGCCTCGCATCAAAGACATCCAGGGGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e1682f23b3dd1622501cd048a02e5936f44290dcad022e8451057d83e7e74ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4367
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel Pseudomonas aeruginosa bacteriophage, KPP25, of the family Podoviridae Miyata,R., Yamaguchi,K., Uchiyama,J., Shigehisa,R., Takemura-Uchiyama,I., Kato,S., Ujihara,T., Sakaguchi,Y., Daibata,M. and Matsuzaki,S. 2014 24801109 GenBank