Protein

View in Explore
Genbank accession
UYD58322.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MANQFMAHFGPSYVESTHFGENNAVKYKLELQGSNSDSSVKTSFVRVNGNNLLSNTPRGITAITIDANGVGSNSATFDIYGRPEHFDTLRTYLMSAPSNRIVALVSWDAIKSTEAFDTFMRQYGAVTWPGSEYLNKANTNSSFYSRSSYVAIFNTNLRRFCYENFVGNNPARNEDTTAYVEAVFDIVDDIGACGVPERKVDEMSEHFSSASDYAFYRFFPTENISEWESVYHVKCELYRDQVLIDNGGQTRLYVWSQDAAGKWYNQLILGDTSLPAGVWTAYEGYYKLPAQSLGATRWGSQVFKWPSSVKNGLAGCRNVTITRVTRDDDDKVIDAAIGVNGIRANSIKDSSDLGNPVMQLLNLKPKNALTSNEFRERK
Physico‐chemical
properties
protein length:378 AA
molecular weight: 42280,45370 Da
isoelectric point:5,65948
aromaticity:0,12169
hydropathy:-0,42857

Domains

Domains [InterPro]
DC_0912
STR
1–378
DC_0912
PS52031
LEC
23–199
PS52031
UYD58322.1
1 378
Architecture
STR
STR 1-378
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD58322.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,0207
Central domain 168 366 200 0,3224
C-terminal 367 378 11 0,9458
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-366
C-terminal
367-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage UP87
[NCBI] 		3101598 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD58322.1 [NCBI]
Genbank nucleotide accession
OP380597.1 [NCBI]
CDS location
range 149347 -> 150483
strand +
CDS
ATGGCGAATCAATTTATGGCCCATTTTGGGCCATCTTATGTTGAATCGACACATTTTGGCGAAAATAATGCCGTAAAATATAAACTTGAACTGCAGGGGTCCAACTCGGACTCCTCAGTCAAAACATCTTTTGTGCGCGTTAATGGGAACAATTTGCTGTCGAACACACCCCGCGGCATAACGGCTATTACAATAGACGCTAATGGTGTAGGTAGCAATTCAGCAACGTTTGATATATACGGCCGGCCTGAACATTTTGATACGTTGCGCACATATTTGATGTCGGCTCCTTCAAATCGGATTGTTGCTCTTGTTTCTTGGGATGCTATCAAATCGACTGAAGCTTTCGATACGTTTATGCGTCAATATGGAGCAGTTACGTGGCCAGGTAGTGAATATCTGAATAAAGCAAATACCAATAGTTCATTTTATAGCCGAAGCTCGTACGTTGCTATTTTCAACACAAATCTGCGTAGATTTTGCTATGAAAATTTTGTTGGCAATAATCCTGCTAGAAATGAAGATACGACAGCATATGTCGAAGCTGTTTTTGATATTGTTGACGATATTGGTGCATGCGGTGTCCCGGAGCGAAAAGTGGATGAAATGTCTGAACATTTTTCGTCTGCTAGTGATTATGCGTTTTATCGTTTTTTCCCGACTGAAAACATCTCGGAATGGGAATCGGTTTACCATGTCAAATGTGAGCTTTATCGCGACCAAGTTCTCATCGATAATGGTGGACAGACACGTCTGTACGTTTGGTCGCAGGATGCGGCAGGTAAATGGTACAACCAACTTATCCTAGGTGATACGTCATTGCCTGCTGGAGTGTGGACAGCTTATGAAGGTTATTACAAACTGCCAGCTCAAAGTCTTGGGGCAACACGGTGGGGTTCTCAGGTGTTTAAATGGCCTTCATCAGTAAAGAATGGTTTAGCTGGATGTCGAAACGTTACAATCACACGAGTAACTCGTGATGATGACGATAAAGTCATAGACGCTGCTATTGGTGTCAATGGTATTCGAGCTAATTCTATTAAGGATAGTTCCGATTTAGGTAATCCGGTTATGCAATTGCTTAATCTGAAACCGAAAAACGCTTTGACTTCAAATGAGTTTAGAGAACGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8b907f374d384b044a50ff52bde4b008dbb0f1c49b49a411c0e6de42e9976ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6602
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank