Protein

View in Explore
Genbank accession
ARW58726.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MFDGRMPTSKEGFAEVFNSRSLADLYNKSLGLVRSPVTGIENGNVIALQLQSQYIPKGVSYYGTIGTALLPVTQLMPRTIQSNAQSDRNISFLTSSGTVNLTHARTGYGDYVIEFDAAVTITHIKYMGTVSGGSYQLVRIAEDNTETATTLGTVLAGEANCYPITSPVASKKYRLKSVGGANSVDAAFVLLSSVDQAPSTPQTQPTWAALAHTNTRTHGDIDYSDEIMFAADACGVAGPFKIVGNIVPNKLTRVYCPKLRFTQRSGS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 28605,97550 Da
isoelectric point:8,36234
aromaticity:0,08240
hydropathy:-0,10225

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARW58726.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7359
Central domain 11 207 198 0,0467
C-terminal 208 267 59 0,9690
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Y3
[NCBI] 		1983553 Uroviricota > Caudoviricetes > Sasquatchvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARW58726.1 [NCBI]
Genbank nucleotide accession
KY984068 [NCBI]
CDS location
range 51383 -> 52186
strand -
CDS
ATGTTTGATGGCCGTATGCCTACTTCAAAAGAAGGCTTCGCAGAGGTCTTCAACTCACGTTCTCTCGCAGACTTGTACAACAAAAGTCTCGGACTTGTCCGCAGCCCGGTAACAGGTATTGAGAACGGTAACGTTATTGCGTTGCAGCTCCAGTCTCAATACATTCCAAAGGGTGTATCGTACTACGGGACTATTGGTACGGCGCTCTTGCCTGTCACACAGCTTATGCCTCGTACTATTCAGAGTAACGCACAGTCTGATCGTAACATCTCGTTTCTTACTTCTAGCGGCACTGTCAACCTTACTCACGCTCGTACTGGCTATGGCGACTACGTGATTGAGTTTGATGCTGCGGTTACTATCACTCACATTAAGTACATGGGTACTGTCAGTGGTGGCTCGTATCAGCTTGTGCGTATTGCGGAAGATAACACAGAGACAGCTACTACTTTAGGTACTGTTTTAGCAGGAGAAGCAAACTGTTATCCTATAACTTCACCTGTTGCTTCGAAGAAATATCGTCTCAAGTCCGTCGGTGGCGCTAATTCTGTTGATGCTGCTTTCGTTCTGCTTTCGTCTGTGGACCAAGCTCCGTCCACGCCCCAGACTCAACCTACTTGGGCCGCACTTGCACACACGAATACACGTACTCACGGTGATATTGATTACTCTGATGAAATCATGTTTGCTGCTGATGCGTGTGGTGTTGCAGGTCCGTTTAAAATTGTAGGCAACATCGTGCCGAACAAACTGACTCGCGTGTACTGTCCTAAGCTTCGCTTCACGCAAAGGAGTGGCTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f56947232f2e5b37f61b87ddb09d641ca5d9b4e7f53e2882697079ae429464d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4445
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy Myoviridae Buttimer,C., Born,Y., Lucid,A., Loessner,M.J., Fieseler,L. and Coffey,A. 2018 29777834 GenBank