Protein

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Genbank accession
QEI23823.1 [GenBank]
Protein name
DNA stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVLGSKLYKGETVVGDVAGSGRVSLAHGRTSQAVGVNGQLIEYQYDGTIKTVSNWPADSDYTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGTTTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAVDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:472 AA
molecular weight: 52453,50190 Da
isoelectric point:5,76571
aromaticity:0,10593
hydropathy:-0,27797

Domains

Domains [InterPro]
IPR021098
STR
4–472
IPR021098
QEI23823.1
1 472
Architecture
STR
STR 4-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEI23823.1
1 472
Domain Start End Length (AA) Confidence
N-terminal 1 87 87 0,6304
Central domain 88 286 200 0,0769
C-terminal 287 472 185 0,4324
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-87
Central
88-286
C-terminal
287-472

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SI5
[NCBI] 		2592211 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI23823.1 [NCBI]
Genbank nucleotide accession
MK972695 [NCBI]
CDS location
range 26044 -> 27462
strand -
CDS
ATGCCGATTCAACAACTCCCCATGATGAAGGGAATGGGTAAAGACTTCAAGAATGCCGACTATATTGATTACCTGCCAATCAATATGTTGGCTACACCGAAAGAAGTCCTCAACTCATCGGGTTATTTACGCTCATTCCCAGGCATAGCGAAGCGCAACGATGTAAATGGTGTATCGCGTGGTGTTGAATACAATACCGCGCAGAACGCTGTATATCGCGTTTTAGGCAGCAAGCTCTACAAAGGGGAAACCGTAGTAGGTGATGTTGCCGGAAGTGGTCGCGTATCTCTTGCTCACGGTCGAACTTCGCAGGCTGTGGGTGTGAACGGTCAGCTTATCGAGTACCAATACGATGGCACCATCAAAACCGTCTCAAACTGGCCTGCAGACAGCGATTACACGCAGTATGAGTTAGGCTCAGTCCGCGACATTACGCGCTTACGTGGGCGTTATGCATGGTCAAAAGACGGTACTGATTCGTGGTTTATCACTGACCTTGAAGATGAGTCGCATCCTGACAGATACAGCGCACAATATCGCGCAGAGTCGCAGCCTGACGGCATCATCGGCATCGGCACATGGCGAGACTTCATCGTCTGTTTTGGCTCGTCGACGATAGAGTATTTTTCGCTTACCGGAACAACCACAGCAGGAGCAGCGCTTTACGTTGCCCAGCCATCTCTAATGGTACAGAAGGGTATTGCCGGAACATACTGCAAAACGCCGTTCGCTGATTCATACGCCTTTATCAGTCATCCGGCTACTGGTGCACCTTCCGTCTACATCATCGGGTCAGGGCAGGCTTCACCAATTGCGACCGCCAGTATTGAGAAGATTATCCGCTCATACACCGCTGAAGAACTGGCGACGGGTGTGATGGAGACTTTGCGCTTCGATTCTCATGAGCTTCTGATTATTCATCTCCCTCGCCATGTTCTGGTTTACGACGCATCGTCCAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACCGGGCTTTACGATGACGTTTATCGTGCTGTCGACTTCATGTACGAAGGCAATCAGATAACGTGCGGCGATAAATCAGAAGCAGTGACAGGGCAGTTGCAATTCGACATTAGTAGTCAGTACGACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAACGCCAGATGCTTCGATCTGGAAGTTGAATCCTCGACAGGCGTTGCGCAGTACGCTGACCGACTGTTCCTGTCTGCAACAACAGACGGCATCAATTACGGTCGCGAACAGATGATTGAGCAGAATGAGCCGTTTGTGTACGACAAGAGAGTTTTATGGAAGCGTGTAGGGCGTATTCGTAGATTAATCGGATTCAAACTGCGGGTAATCACCAAATCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf25c811a9128e361298460a0fbe5e973ebb15ff12a3ea936b2d2d6565e50d65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank