Protein

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Genbank accession
BAU40202.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MDSSKIYFKFLGGPSLMPSGTNAHMPGTCVEHLTLSGPGSVTGTGESFYQSQTFEANRNGIFRDLHIEKFDKAGIIITDSYDNYFSNIRFWNIGDTTTYGWGILHDRVNWAANNGYCSTGNHYENISCMHIYRGIGVTPGNQIIEGHFYRITGEFCDGTVETYAGTAPSGGWAGTNSFIGTYSEMNTSFGIKSPNGTEIEVYAATYPGSGNNQSNYSGAYVRMLNGVLSVGNGGTGNNSYMRFLKTNGSTGSTLQYNNSLSKTQILSSNGTAMLSVYDGIAGGGTSYTQFADPSDTTKARVYYGVGTNAFIDYGIQNTSAFTFNGNVYFTNPVTFNGTHTVTNAANPQTVYKSTNAATTTFYAGVNGTAQAFVLYDQIGATTIASFYSVAGGNKINLAVPTTINATATITGAVTLNSSLALTTTANPTTTYTSSSGTNMSVGVNGASGAVSIFDIVGGVSVARFNSLANGGKLVVSYGLTAMRTGANPTVGTATLVAGVVTVNTTAVNANSKIFVSRNTPGGTVGNLYAQTADIVAGTSFKITSSSNTDTSTVNWFIVDGI
Physico‐chemical
properties
protein length:561 AA
molecular weight: 58734,06980 Da
isoelectric point:6,23259
aromaticity:0,11052
hydropathy:-0,09305

Domains

Domains [InterPro]
IPR056204
ENZ
487–558
IPR056204
IPR056204
ENZ
490–558
IPR056204
BAU40202.1
1 561
Architecture
ENZ
ENZ 487-558 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAU40202.1
1 561
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0129
Central domain 11 239 230 0,9908
C-terminal 240 561 321 0,8536
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-239
C-terminal
240-561

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAU40202.1 [NCBI]
Genbank nucleotide accession
LC121084.1 [NCBI]
CDS location
range 165845 -> 167530
strand -
CDS
ATGGATTCATCAAAAATCTATTTCAAATTTCTTGGCGGTCCTTCTTTGATGCCAAGTGGTACGAATGCCCACATGCCGGGAACTTGTGTTGAACATCTGACCCTTTCAGGTCCGGGTTCTGTGACTGGAACGGGTGAATCGTTCTACCAAAGCCAAACATTTGAAGCAAACCGTAATGGTATCTTCCGTGATCTGCATATTGAGAAATTCGATAAAGCTGGTATTATCATCACGGATAGCTATGACAACTATTTCAGCAATATTAGATTCTGGAACATTGGTGATACGACAACATACGGTTGGGGTATTCTGCATGATCGTGTGAATTGGGCTGCTAATAATGGCTACTGCTCAACTGGTAACCACTATGAAAATATCTCTTGCATGCATATCTACAGAGGTATTGGTGTTACTCCGGGCAACCAGATTATTGAAGGTCACTTCTATAGAATCACGGGTGAATTCTGTGATGGTACAGTAGAAACATATGCCGGGACTGCTCCTAGTGGTGGTTGGGCTGGAACAAACTCATTCATCGGAACTTATTCGGAAATGAATACCTCATTCGGTATTAAATCTCCGAACGGTACTGAAATTGAAGTTTATGCGGCTACCTATCCGGGTAGTGGTAACAACCAATCGAACTATTCCGGTGCATATGTGAGAATGTTGAATGGTGTATTGTCTGTTGGTAATGGTGGTACGGGTAATAATTCTTACATGAGATTCCTCAAAACCAATGGTTCTACAGGTTCAACGCTTCAATACAACAATTCACTTTCAAAGACACAGATTCTGTCATCAAACGGAACTGCGATGTTGAGTGTTTATGATGGTATTGCTGGTGGTGGAACATCATATACACAATTTGCTGATCCATCTGACACAACAAAGGCCCGTGTTTATTACGGTGTTGGTACGAATGCTTTCATTGATTATGGTATTCAAAATACTTCTGCATTCACATTCAATGGAAACGTTTATTTTACCAATCCGGTCACTTTCAATGGAACACACACAGTAACGAACGCTGCCAACCCGCAAACCGTCTATAAATCGACCAATGCGGCAACCACAACGTTCTATGCTGGTGTCAATGGAACTGCACAGGCATTTGTTCTTTACGATCAGATTGGAGCAACTACAATCGCTTCTTTCTATTCGGTTGCTGGTGGTAACAAGATTAACCTTGCTGTACCAACGACGATCAATGCAACAGCCACAATTACCGGTGCTGTGACGTTGAATTCAAGCTTGGCTCTGACTACAACGGCTAACCCAACCACAACATACACATCATCTAGCGGTACTAATATGTCAGTTGGTGTGAATGGTGCTTCTGGTGCCGTTTCAATCTTTGATATTGTTGGTGGTGTTTCGGTCGCTAGATTTAACTCTCTTGCCAACGGTGGTAAGTTGGTTGTGAGTTATGGTCTAACAGCGATGAGAACGGGCGCTAACCCAACAGTCGGGACGGCAACTCTTGTTGCGGGTGTGGTGACTGTGAATACCACTGCGGTAAACGCAAACAGCAAAATCTTTGTTTCCCGGAATACTCCGGGTGGTACGGTTGGTAACTTGTATGCACAAACCGCTGATATCGTTGCGGGAACGTCATTCAAGATTACATCGTCATCAAACACGGATACATCAACAGTGAATTGGTTCATTGTGGATGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6123c2d05e3389b26a318ea1b905329d887fe278e477c1016d09d53bdede12a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank