Protein

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Genbank accession
XYM59245.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKDFDFEALQNLANQVKADSEAAGASAAAAAASEGAAKTSETNSKASEQAALTARQQAGSARDQTQDLYNQTVDLVAGVQAPDKLPTSPGSSRAWMKIANVKNAGQSNCFAQFIIGGGANFGSANLPVDIFSISGRGLPDTLTSNNIDANFTQCALIAAKNSTSRLKLGVVKNTDGSFDVYLLSPNGYFPVMWLNRLNVQSNNGLITGPIIDRTGYSWITTEPAGIVYNSPTDYLMANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGCVVRANNSNAIVYSIPENGQGMYFRPNGDLNSAKQVVFDATNFTVTGLNANFSNAVTMSSTLRVNGSSNLRGGVDVTASQGLPLKETTATTGIGVNFIGSNVTECSFGIENTAGGSAVFHNYARGASNSATKNNQLLGGYGSRPWLGSAYTAHSNAALHFLGAGDASETNHGGWIRLLVTPKGKNIGWRSPVMRISDNGDAWLSVAGSMVSPDLDEVRSFETLNAAVPKFNAPTNQDGRGLKIVADGAPEINMIAPRASGTSSPAVRAMWCDGSLSNSDKYIGAVQAWSTFFFGASGHDGEKFDSMRGAVNIQSTEGWGKTSTPTRILFETCSSGSTTRTARWCVDHNGTLTPMADNSYDLGWGSGRVRNIYAANGNINTSDARLKNDVRTMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEHTVVSEYGPANEDGTENPIYKTIPAGDRYSFRLEELNLFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:883 AA
molecular weight: 94000,50900 Da
isoelectric point:5,13798
aromaticity:0,08267
hydropathy:-0,23828

Domains

Domains [InterPro]
DC_0313
STR
1–881
DC_0313
IPR036388
RBD
737–882
IPR036388
cd10144
CHP
751–873
cd10144
IPR030392
CHP
751–810
IPR030392
IPR030392
CHP
751–881
IPR030392
XYM59245.1
1 883
Architecture
STR
STR 1-882 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM59245.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,7605
Central domain 233 431 200 0,5717
C-terminal 432 883 451 0,9044
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage CBB98
[NCBI] 		3414239 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM59245.1 [NCBI]
Genbank nucleotide accession
PV402687.1 [NCBI]
CDS location
range 27868 -> 30519
strand +
CDS
ATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGACTGGCGCAAGATGTTGCTGAAACCCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGGATTTTGATTTCGAAGCACTTCAAAATCTTGCTAATCAGGTGAAGGCAGACTCAGAAGCTGCGGGCGCAAGCGCTGCGGCGGCTGCTGCGTCAGAAGGGGCGGCGAAAACTTCAGAAACTAACTCTAAGGCCTCGGAGCAAGCGGCGCTAACAGCACGGCAACAAGCAGGGTCTGCAAGGGATCAGACTCAAGATCTCTATAACCAGACTGTCGATCTTGTGGCTGGCGTTCAAGCGCCGGATAAGCTGCCAACCTCGCCAGGAAGCTCGCGGGCGTGGATGAAGATTGCCAACGTTAAGAACGCTGGACAGTCAAACTGTTTTGCGCAATTTATTATTGGTGGCGGCGCTAACTTTGGTTCGGCAAATCTCCCGGTAGATATCTTTTCTATTTCTGGCCGTGGTCTTCCCGATACGCTAACAAGTAATAATATTGACGCCAACTTTACTCAATGCGCACTGATTGCCGCAAAAAATAGCACATCACGTTTGAAGTTGGGGGTTGTGAAAAACACCGACGGATCTTTTGATGTTTATTTGCTCTCGCCTAACGGTTACTTTCCCGTTATGTGGTTAAACCGTTTGAACGTGCAATCTAATAATGGGTTGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAGCCGGGATTGTATATAATTCACCGACTGATTATTTGATGGCTAACGATAGCACGATCCCGCGCACCAACGTAGCTAACACGTTCAGTCAACCACAAGCGATCAGCGTGCCTGGCGGAAACGCTACGCTGACCCTGAATGGTTGCGTAGTTAGGGCAAATAACAGTAATGCGATCGTGTACTCAATCCCTGAAAATGGTCAGGGAATGTACTTCCGCCCTAATGGTGATCTGAACAGCGCGAAGCAGGTTGTTTTTGATGCAACAAACTTTACTGTTACCGGGTTGAATGCCAATTTTAGCAACGCCGTTACAATGTCAAGCACGCTACGCGTTAATGGTTCATCCAACCTTCGAGGCGGTGTTGATGTTACCGCTTCTCAGGGGTTGCCGCTGAAGGAAACGACTGCAACAACCGGGATCGGCGTTAACTTTATTGGCAGTAATGTAACGGAATGCTCTTTCGGGATTGAAAATACGGCTGGCGGATCTGCTGTGTTCCATAACTATGCGCGAGGTGCATCTAACAGCGCCACGAAGAACAACCAGCTTTTAGGTGGTTACGGATCTCGACCGTGGTTGGGTTCTGCGTATACAGCGCACAGTAACGCCGCCTTACACTTCTTGGGGGCTGGCGATGCATCCGAAACAAATCACGGAGGCTGGATTCGTCTATTGGTTACGCCCAAGGGGAAAAATATTGGGTGGCGTTCTCCAGTTATGCGAATTTCTGACAATGGTGATGCGTGGTTGTCCGTCGCTGGTAGCATGGTGTCGCCTGATCTTGATGAGGTGCGTAGCTTTGAAACGCTTAACGCAGCAGTTCCGAAATTCAACGCCCCAACCAATCAGGATGGTCGAGGACTGAAAATTGTGGCGGATGGTGCGCCGGAAATTAACATGATTGCCCCTCGCGCTTCTGGTACATCATCTCCCGCGGTAAGGGCAATGTGGTGTGATGGTAGCTTGTCGAACTCGGATAAATATATCGGCGCTGTACAGGCATGGTCTACTTTCTTCTTTGGGGCGTCGGGCCACGATGGGGAAAAATTCGATTCAATGCGCGGCGCTGTTAACATTCAGAGTACGGAGGGATGGGGTAAAACATCAACGCCAACGCGAATCTTGTTCGAAACCTGTTCGTCAGGCTCTACTACTCGAACTGCTCGCTGGTGCGTTGATCACAATGGAACCCTAACCCCTATGGCCGATAATTCTTACGACTTAGGGTGGGGAAGCGGTCGAGTCAGAAATATTTACGCGGCAAACGGGAATATCAACACCTCCGACGCCCGGCTGAAGAATGATGTTCGAACCATGAGCGACCCTGAAACCGAAGCGGCAAAAGCCATTGCGAAGGAGATTGGGTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTTCGTGAGCACTGCGGTTTGACCGTACAACGTGCGATGGAGATCATGGAAAGTTTTGGGCTTGAGCCGTTCAAATATGGCTTCATCTGTTATGACAAGTGGGATGAACACACGGTTGTTTCAGAATACGGGCCAGCAAATGAAGACGGAACCGAAAACCCGATCTACAAAACCATTCCGGCTGGCGATCGCTACTCGTTCCGCCTTGAGGAGTTGAACCTGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6c3a147bfb87b4c2213b9c8104a77d7aab302960b21b9589be9c0f2599e103a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50