Protein

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Genbank accession
YP_009850443.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MADLKAGSTVGGLPIWHQGTMPLVPVGNSLTYRGYTVYTTNDKPKAADNDFVSKASGGTGSQGFQKEVEFKAGIKISATFSGGSNLNGLYSGNGDGDTRENSNMDLRSWYGIGIWNSCTNDGVQGRTIWFSARRGTIGTVGDIVSGSQVIANASAPTAAQHLTRKDYVDGRINTVTTNANSRVLKSGDTMTGVLRANAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:230 AA
molecular weight: 24213,60790 Da
isoelectric point:9,18399
aromaticity:0,07826
hydropathy:-0,31304

Domains

Domains [InterPro]
DC_0466
STR
1–226
DC_0466
IPR005601
STR
67–192
IPR005601
YP_009850443.1
1 230
Architecture
STR
STR 1-226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009850443.1
1 230
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,6552
Central domain 59 219 162 0,0597
C-terminal 220 230 10 0,9742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-219
C-terminal
220-230

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Marfa
[NCBI] 		2587809 Uroviricota > Caudoviricetes > Marfavirus >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009850443.1 [NCBI]
Genbank nucleotide accession
NC_048798 [NCBI]
CDS location
range 153712 -> 154404
strand +
CDS
ATGGCTGATTTAAAAGCAGGTTCTACAGTCGGAGGTTTACCAATTTGGCATCAAGGTACTATGCCATTGGTCCCAGTTGGAAACTCTTTGACTTATCGTGGTTATACGGTTTACACGACTAATGATAAACCTAAAGCAGCGGATAACGATTTCGTATCTAAGGCTAGTGGTGGTACAGGTTCTCAAGGTTTCCAAAAAGAAGTTGAATTTAAAGCTGGTATTAAGATTTCCGCAACGTTTTCTGGTGGTTCAAACCTGAATGGGCTGTATTCTGGTAACGGAGATGGAGATACCAGAGAAAATTCTAACATGGATTTGCGTTCATGGTATGGTATCGGTATTTGGAACTCATGTACAAATGATGGGGTCCAGGGACGCACAATCTGGTTTAGTGCTAGGCGGGGTACTATCGGAACAGTTGGTGATATCGTTTCAGGTAGTCAAGTTATTGCTAATGCTTCGGCGCCAACAGCAGCCCAGCATTTAACACGTAAAGATTATGTTGATGGACGAATAAATACTGTTACTACTAATGCAAACAGCCGGGTTTTGAAATCTGGTGATACTATGACTGGCGTACTTAGAGCTAACGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d3504995e2a8a99b0183fc6fd19e3c4a783dd560e94a9820cd90e4a5a3b8cc0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50