Protein

View in Explore
Genbank accession
QGZ15924.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MHLPNGAQIFVETSRGEEIEATAVTNAKNPIATVASKGDLAKGDYVIVTQSTWAKMVSRVLIVTDAQETSITLAGIDTTDALVFPAGGTMSFAKITGWTEIPCVQEIGQDGGEQQYYTYQCLSDDKEQQIPTFKSAISLTYTFAHEFDNPIYPILRKLDSSGQVTAVRMYVPKANEMRMWAGILSFNDIPSTQVNEMETVQLAVSLKGDFTFVSSALASPGA
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24090,97070 Da
isoelectric point:4,60199
aromaticity:0,08559
hydropathy:-0,05541

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
QGZ15924.1
1 222
Architecture
ATT
TAS
ATT 1-50 | TAS 51-214 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-6
[NCBI] 		2608403 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus Sfin1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ15924.1 [NCBI]
Genbank nucleotide accession
MN393473.1 [NCBI]
CDS location
range 16584 -> 17252
strand -
CDS
ATGCACTTACCAAATGGCGCGCAAATTTTCGTGGAAACCTCTCGCGGAGAAGAGATCGAGGCGACCGCTGTCACTAACGCAAAAAATCCTATTGCTACGGTTGCATCTAAGGGCGACTTGGCGAAAGGTGATTACGTTATTGTAACTCAGTCAACTTGGGCTAAGATGGTTAGTCGAGTACTAATTGTTACTGACGCCCAAGAAACAAGCATTACTCTTGCTGGGATTGACACTACTGATGCTCTTGTTTTCCCGGCTGGCGGTACAATGAGCTTTGCAAAAATTACTGGCTGGACTGAGATCCCTTGCGTACAGGAGATTGGTCAGGACGGCGGCGAGCAGCAGTATTACACTTATCAGTGTTTGTCTGACGATAAAGAGCAGCAGATCCCGACGTTTAAGTCTGCAATCTCGCTAACGTACACCTTCGCGCACGAATTTGATAACCCTATCTATCCTATTCTGCGTAAGCTGGATTCTTCTGGTCAGGTAACTGCGGTTCGGATGTATGTTCCAAAAGCGAACGAGATGCGCATGTGGGCTGGTATCTTGTCTTTTAACGACATTCCATCTACGCAAGTAAACGAAATGGAAACGGTACAACTCGCCGTATCCCTGAAGGGTGATTTCACTTTCGTTTCATCCGCTCTGGCATCACCTGGTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5bc716f55964dfdd20d1598b7334b50de63f6c57266532e2abdd429ba9c389d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Sfin-6 Ahamed,S.T. and Giri,N. 2019-08-22 — GenBank