Protein

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Genbank accession

WJJ60253.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence RBPdetect

Probability 0,87

Evidence RBPdetect2

Probability 0,77

Protein sequence

MSTITQFPSGNTQYRIEFDYLARTFVVVTLVNSSNPALNRVLEVGRDYRFLNPTMIEMLVDQSGFDIVRIHRQTGTDLVVDFSNGSVLTASDLTNSELQSIHIAEEGRDQTVDLAKEYADAAGISAGNAKDSEDEARRIASSIKSSGLIGYIPRRSFEKGFNVTAWNEALLWEEDGDYYRWEGTLPKNVPAGSTPESSGGIGLGAWVSVGDILEQKVYIVVITGQSNAQGANSGGPNPASPHVKVWDGTTNTWGSSDYTQLPFSQSTPNGNGGNNNIALSFAHRLIDEHRNSKVYVIYDAVGGRPISDWVGSGTASIRYAAIKAKVEAALATPELVAAGKTKIDYLIWAQGEEDALTDTIMVYRDKFKTLDTQFRSEAWMENHTPMFVMGMSGLHTRYQVWQGQLSYCENQNRNCIYVNSMGLKTQYDVSGTGDYTHWLGDSLWEHGYHRIWYALQERGITHRNQLAPFYGRGTGPWDGQSDAIAMFSSLVSIDSATSQFPTNSVAATGSITWGLNCAADGNYTFAGGHTVTTDNTCNYSAAWGRSISLGPGAQYSASFGRENH

Physico‐chemical properties

protein length:	564 AA
molecular weight:	61747,52490 Da
isoelectric point:	5,16481
aromaticity:	0,10461
hydropathy:	-0,37092

Domains

Domains [InterPro]

DC_0369
STR
1–561

DC_0369

IPR005604
ATT
10–113

IPR005604 G3DSA:2.10.10.80 SSF52266

IPR040775
RBD
154–211

IPR040775 IPR052940

IPR036514
STR
218–466

IPR036514

IPR005181
ENZ
219–428

IPR005181

WJJ60253.1

1 564

Architecture

ATT

STR

ATT

STR

ATT 1-113 | STR 114-150 | ATT 151-217 | STR 218-561 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0369	STR	DC_0369	1	561	Novel HMM	DC_0369	Central	Low	Positional only	69 proteins / 69 hits
IPR005604	ATT	DC_0240	10	113	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	151	217	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	154	211	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR052940	Unmapped	-	215	428	InterPro	Carbohydrate Esterase 6	-	-	-	-
SSF52266	STR	SSF52266	217	462	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR036514	STR	IPR036514	218	466	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
IPR005181	ENZ	DC_0247	219	428	InterPro cluster	Sialate O-acetylesterase domain	Central	High	Text match	78 proteins / 79 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WJJ60253.1

1 564

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	383	383	0,5478
Central domain	384	553	171	0,7245
C-terminal	554	564	10	0,4659

Note: Constraints were applied during segmentation.
Fixed 136 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-383

Central
384-553

C-terminal
554-564

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage ST-29 [NCBI]	2725683	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella typhimurium [NCBI]	90371	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WJJ60253.1 [NCBI]

Genbank nucleotide accession

OQ860978 [NCBI]

CDS location

range 37374 -> 39065
strand +

CDS

ATGTCCACGATTACACAATTCCCTTCAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTGCCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGGTTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGTAATGGCTCAGTGTTGACAGCTAGTGACCTGACCAATTCAGAGCTTCAGTCTATCCATATTGCAGAAGAAGGTCGAGACCAAACTGTTGACTTAGCGAAGGAATATGCCGATGCTGCTGGTATCTCTGCTGGCAACGCTAAGGATAGCGAGGACGAAGCACGACGAATCGCTTCGAGTATCAAGTCGTCTGGACTAATTGGCTATATCCCCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTACAGCATGGAACGAGGCCCTGCTATGGGAAGAGGATGGTGATTATTACCGCTGGGAGGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAATCATCTGGCGGTATTGGTCTGGGTGCTTGGGTTAGTGTTGGTGATATCCTTGAGCAGAAGGTTTACATAGTAGTAATCACTGGGCAGTCGAATGCTCAGGGTGCTAACTCCGGCGGGCCTAATCCAGCGTCGCCTCATGTTAAAGTATGGGATGGTACTACTAATACTTGGGGTAGTAGTGATTATACGCAATTACCTTTCTCCCAAAGTACCCCTAATGGTAATGGCGGGAATAACAACATTGCTTTGTCTTTTGCTCATCGTTTAATTGATGAACATAGGAATTCCAAAGTTTACGTTATCTACGATGCTGTTGGTGGGCGGCCTATTAGTGATTGGGTCGGTTCTGGCACTGCATCTATTCGTTACGCTGCAATCAAAGCTAAAGTAGAGGCTGCATTGGCTACACCTGAACTAGTGGCTGCTGGTAAAACTAAGATTGATTACCTGATTTGGGCGCAAGGGGAAGAAGATGCACTGACTGATACCATTATGGTTTACCGTGATAAGTTTAAAACCTTGGATACACAATTCCGTTCTGAAGCGTGGATGGAGAATCATACCCCAATGTTTGTGATGGGTATGTCTGGTCTTCATACTCGTTATCAGGTATGGCAAGGACAATTGAGTTACTGTGAGAACCAGAACCGTAACTGTATTTACGTTAACTCTATGGGCCTAAAGACTCAGTATGACGTATCAGGTACAGGTGATTATACACACTGGTTGGGTGATTCACTGTGGGAGCATGGTTATCATCGTATCTGGTATGCACTCCAAGAACGAGGCATTACTCACCGTAACCAACTGGCTCCGTTCTATGGACGTGGTACTGGTCCGTGGGATGGGCAGTCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATCTCAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGACTGAACTGTGCAGCAGATGGTAACTACACCTTCGCAGGCGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGAGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGGGAGAACCAC

Genome Context

Tertiary structure

PDB ID

bde97434742d1e74bef779f9348129ddd204a5b04eebc8895c283c1a75d3ec87

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7941

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence