Protein

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Genbank accession
AGF88142.1 [GenBank]
Protein name
agglutinating adhesin
RBP type
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MRKIVVVLGLALASLSFASVAKDNDNNSRGDVTVVGDGTGSVHISQCASTWNCNNSELNVEFTGDVENVTINGEHTVIKGQNGKDGKDGIDGKDGANGKDGINGIDGAKGDKGDKGDTGASGKDGKDGLNGTNGTNGRDGVDGKDGAKGDTGAQGERGEQGIQGEAGKDGLNGENGKDGLNGTNGLDGAKGDKGDEGKQGIAGIAGLNGKDADMTQVNANTEANKSISKRQDAFEKSTNQRFANMDKRIDENRKNASAGIAGVAAMANIPQVSQNSSFSVGAGVGSYDSEQGLAVGMSARFNENIVTKASVAATTQDDFVFGAGVSYEW
Physico‐chemical
properties
protein length:329 AA
molecular weight: 33357,58530 Da
isoelectric point:4,72039
aromaticity:0,03647
hydropathy:-0,69726

Domains

Domains [InterPro]
DC_0989
ATT
1–85
DC_0989 IPR008160 IPR008160 G3DSA:3.30.1300.30
IPR050938
Unmapped
69–225
IPR050938 G3DSA:3.30.1300.30
IPR008160
STR
80–137
IPR008160 DC_2298 IPR005594
IPR045584
RBD
238–329
IPR045584
AGF88142.1
1 329
Architecture
ATT
STR
STR
RBD
ATT
ATT 1-85 | STR 86-137 | STR 152-255 | RBD 256-269 | ATT 270-329
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage FSL SP-058
[NCBI] 		1173761 Uroviricota > Caudoviricetes > Schitoviridae > Ithacavirus > Ithacavirus SP058
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enterica subsp. enterica serovar Dublin
[NCBI] 		98360 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF88142.1 [NCBI]
Genbank nucleotide accession
KC139517 [NCBI]
CDS location
range 11207 -> 12196
strand +
CDS
ATGCGTAAAATTGTAGTAGTACTCGGCCTTGCACTGGCCTCTCTGTCTTTTGCTTCTGTAGCAAAAGATAATGATAACAACTCTCGTGGAGATGTTACTGTTGTTGGTGATGGAACTGGTTCAGTTCATATCAGTCAATGTGCCTCTACTTGGAATTGTAATAATTCCGAGTTAAATGTGGAGTTCACTGGTGATGTTGAAAACGTCACTATTAATGGTGAACACACTGTCATTAAAGGACAAAATGGCAAAGACGGAAAGGACGGTATCGATGGAAAAGATGGTGCTAACGGTAAGGATGGCATCAATGGTATCGACGGAGCCAAAGGTGACAAAGGCGATAAGGGAGATACTGGAGCATCTGGCAAGGATGGTAAGGACGGATTAAATGGAACCAACGGTACTAATGGTCGTGATGGTGTTGACGGCAAAGATGGAGCCAAAGGAGATACTGGTGCTCAAGGTGAACGTGGTGAGCAAGGTATTCAAGGCGAAGCTGGTAAAGATGGTCTTAACGGTGAAAACGGGAAAGACGGTCTTAATGGAACTAATGGTTTAGATGGTGCTAAAGGAGATAAAGGTGATGAAGGCAAACAAGGTATTGCTGGAATCGCTGGGCTGAATGGTAAAGATGCAGATATGACTCAGGTCAATGCTAATACTGAAGCCAATAAATCTATTTCTAAGCGTCAGGATGCTTTTGAGAAATCCACCAATCAACGTTTTGCCAATATGGATAAACGTATTGATGAGAATCGTAAAAATGCATCTGCTGGTATTGCAGGCGTAGCTGCTATGGCTAACATTCCACAGGTAAGCCAGAATAGTTCATTCTCAGTTGGTGCTGGGGTAGGTTCATATGATAGTGAACAAGGTCTTGCTGTTGGTATGAGTGCTCGTTTTAACGAGAATATAGTAACCAAAGCTTCAGTAGCTGCCACTACTCAAGATGATTTCGTCTTTGGTGCTGGTGTAAGCTACGAGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b80eb01046d85ddef575dd05cb75528dde42b41d8e071822ee69b9e9c7cbe0c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6325
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50