Protein

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Genbank accession
XYO05824.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSLAPKTYMMALTAEQIEQRLLSIDNMLSKDVIRQSLSSPDAATVPSTKAVADALTPITQTLDGLGDLASKDSVALDSNETGGVLPISKGGSGGSNLSEAQQNLGILSETQIQQLINESIPTIQQVWLDSAQVNGILPIAKGGTGASSPAQALKNLGIHDSNGKVPVSQLPAVALTDTFPVSSEAQMLGLTAQPGDVAIRSDVNKTFILMQEPASTISNWKELLNDAETKLIPQIRESLRRSYAEAGLTVMPGSFSEGGTLNSTSEVLINAADGKAYSWNGTYPPGGYVVTPGTDPTTVVGFISMHNSLLKGVLYSGQGTNSVRFNRGATNSQILTLTQKLLTVRHCSDWGIKCDGTDETAKLQALAADINAIPNPNGYPVKIVFSGQTDVSTPVLSFTTTVKFTRPVFIDGCGETMISYLGTGSTNAFEFGPATLTGDSISPTGFVVHKYYTVANFVVIGGTTSGVCFYFNNYIIYPKVKDCVFKYFGGNGSWAVKFQSNNWWAVVQDCSFDAHNISHSDDGVKRNFVSCPGVALDGTRDEFATRLHAIDNQIFASGWTMGGIAYLLSGWKSRIVGGSIEGMKTDIIIGAGCNDIEIDANYSEKNYPEEASSYIQLSYAGDPYFAVYPWVKRLKVRDMYINMHNTDANATPARFQTFANNVKIQDWDIDGVTLVSSAYELLSYPEIAGHTGNRVNNIILDGDLGAKSLLIDPSYASVYPAGFRNSVKNFSKLVDFSNIVSAVTGAAPLNGTFGITGLTVTSNGSGGAYTFTNGASDNTSASGYERNKLGGQRFYGAFRCTSAPSGQTFLIVSFELNANKNELINNDVVISFWAKANGSPVSVGAIHVMEGSGTQTQSQNTQVIATGSWLRYAMLIKVPNIPLGEAASSVKQSVGITLPVNATFDFNIAGVMVSKGGTTLPFSCGVQ
Physico‐chemical
properties
protein length:928 AA
molecular weight: 98687,84330 Da
isoelectric point:5,26883
aromaticity:0,08728
hydropathy:-0,04784

Domains

Domains [InterPro]
DC_1656
STR
35–225
DC_1656 G3DSA:2.10.10.80 DC_2119
DC_0018
ATT
203–419
DC_0018
XYO05824.1
1 928
Architecture
STR
ATT
STR
STR 35-202 | ATT 203-419 | STR 751-891 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYO05824.1
1 928
Domain Start End Length (AA) Confidence
N-terminal 1 361 361 0,9964
Central domain 362 741 381 0,9941
C-terminal 742 928 186 0,9924
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-361
Central
362-741
C-terminal
742-928

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage TSW001
[NCBI] 		3434942 Viruses > unclassified bacterial viruses >
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO05824.1 [NCBI]
Genbank nucleotide accession
PV714136.1 [NCBI]
CDS location
range 28169 -> 30955
strand +
CDS
ATGAGTTCGCTCGCACCAAAAACTTATATGATGGCCCTAACGGCAGAACAAATCGAGCAGAGATTGTTGTCTATAGACAACATGTTGTCGAAGGACGTTATCCGTCAAAGTCTGTCTAGCCCGGATGCTGCCACTGTTCCTTCTACAAAAGCTGTAGCGGACGCTCTGACCCCGATTACACAAACGCTTGATGGTTTAGGTGATCTCGCATCTAAAGACAGCGTCGCCCTCGATTCAAATGAGACTGGCGGCGTTCTCCCTATTTCTAAAGGGGGTTCTGGCGGGAGCAATCTTTCAGAAGCCCAACAAAATCTCGGTATTCTTTCTGAAACTCAAATCCAGCAGCTCATCAATGAATCTATCCCCACTATTCAACAAGTTTGGTTGGATAGTGCGCAGGTTAACGGCATTTTACCAATAGCCAAAGGCGGAACCGGCGCTTCTTCACCGGCGCAAGCTCTCAAAAACCTGGGGATACACGATTCAAATGGGAAGGTGCCGGTGTCTCAACTTCCGGCAGTAGCACTGACTGATACTTTCCCGGTTTCTAGTGAAGCTCAAATGCTCGGCTTAACTGCTCAACCAGGTGATGTAGCGATCAGGTCTGATGTTAACAAAACCTTTATCTTGATGCAAGAACCAGCGTCAACAATCTCCAACTGGAAAGAATTGTTGAACGATGCCGAAACTAAACTGATCCCCCAAATACGGGAATCATTGCGTCGTAGTTACGCAGAAGCTGGCCTCACGGTGATGCCCGGAAGTTTTTCTGAAGGCGGTACGTTGAATTCAACTTCTGAAGTGTTGATTAATGCGGCAGACGGAAAGGCGTATTCTTGGAATGGCACGTACCCGCCAGGAGGATATGTCGTAACGCCTGGTACAGATCCGACAACAGTTGTCGGCTTTATTTCTATGCACAACTCTCTATTGAAGGGAGTACTCTATTCCGGTCAAGGAACTAATTCTGTACGCTTTAATCGAGGAGCGACCAACTCACAAATCTTGACTCTAACGCAGAAGTTGTTGACAGTCCGCCATTGTTCTGACTGGGGAATAAAGTGTGATGGTACAGATGAAACCGCCAAACTTCAAGCATTAGCGGCCGATATCAATGCTATCCCTAACCCGAACGGTTATCCCGTAAAAATAGTATTTTCAGGCCAAACGGATGTTAGCACCCCCGTCTTGTCATTTACTACCACCGTCAAATTCACGAGACCAGTTTTTATTGACGGTTGTGGTGAAACGATGATTTCATATCTAGGAACTGGTTCTACGAATGCATTTGAATTCGGTCCCGCGACATTGACGGGTGACTCTATAAGCCCGACTGGTTTTGTTGTACACAAATATTACACGGTAGCCAACTTCGTCGTGATCGGGGGAACTACGTCTGGCGTTTGTTTCTATTTCAACAATTATATCATCTATCCTAAAGTCAAAGACTGTGTTTTCAAATACTTTGGCGGGAATGGTTCTTGGGCGGTTAAATTCCAAAGTAACAACTGGTGGGCAGTAGTTCAAGATTGTAGCTTTGATGCGCACAATATCAGCCATTCCGATGACGGAGTAAAACGGAATTTTGTTTCTTGCCCTGGGGTTGCCCTGGATGGGACCCGCGATGAATTCGCAACGCGTTTGCATGCGATCGACAACCAAATCTTTGCAAGCGGTTGGACTATGGGTGGAATCGCATATCTACTTTCTGGCTGGAAGAGCAGAATAGTTGGCGGATCGATTGAAGGTATGAAAACTGATATTATAATCGGGGCCGGTTGTAATGATATCGAAATAGATGCGAATTATTCCGAAAAGAATTACCCGGAGGAAGCTTCGAGTTATATCCAGTTGTCTTACGCAGGTGACCCGTATTTCGCCGTGTATCCTTGGGTAAAACGCCTGAAAGTTCGTGACATGTACATCAATATGCACAACACGGACGCAAATGCGACACCGGCTAGATTCCAAACATTCGCGAACAACGTTAAAATTCAGGATTGGGATATTGACGGAGTTACTCTTGTTTCCAGCGCTTATGAACTGTTGTCTTACCCAGAAATCGCGGGTCACACCGGGAACAGGGTGAACAACATCATTTTAGATGGTGATCTCGGTGCGAAGTCTTTGCTTATAGACCCTAGCTATGCAAGTGTGTATCCCGCCGGTTTCAGAAATAGCGTCAAAAACTTTTCAAAACTGGTTGATTTCTCTAATATCGTCAGTGCAGTTACCGGCGCGGCTCCGCTAAATGGGACTTTTGGAATTACCGGCCTTACTGTTACATCTAATGGTTCTGGAGGAGCATACACATTCACTAACGGAGCTTCTGATAACACTTCGGCGAGCGGATATGAAAGGAATAAGTTAGGAGGCCAAAGATTCTACGGCGCTTTCCGTTGTACAAGTGCTCCTTCAGGGCAAACATTCTTGATCGTTTCATTCGAATTGAATGCCAACAAGAATGAATTAATCAACAACGACGTCGTGATTTCATTCTGGGCCAAAGCTAACGGGTCACCTGTGTCGGTAGGAGCAATCCATGTCATGGAAGGTTCAGGTACTCAAACGCAATCGCAAAACACGCAAGTAATTGCAACCGGAAGTTGGTTGCGTTATGCAATGCTGATAAAAGTTCCGAATATACCTCTTGGTGAGGCCGCTTCTTCAGTGAAGCAATCTGTCGGGATTACATTACCGGTGAACGCGACATTTGACTTCAACATTGCGGGGGTGATGGTTTCTAAGGGGGGAACAACTCTTCCATTTAGTTGTGGAGTCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c6248492ba3acb0a2aa245eff274a6b585c7f9b24498a91bffb4e0006707eca
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7662
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50