Protein

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Genbank accession
XNM19634.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYQTGTATNYKDVLAKLRTFATANGWTAKKWSNPASGEHELVLFSNGDAGNESIHVGYMTHTVDASDVFNIKVWSAVSYVTGTDFDNVAGKSPSRCIGAWNAAMPYHFVVTKQSIMVVLRVSTAFHYAYLGHIRPYTSRGHWPSPLCSAASCSNHNLRWSDTTSKSGSIQRPRSDNYVVIRNDAGDWVNVTTMFPITSGGPIYDSGDYPSGNKIMQKYIWFDAECYGEPEGIYYVQGSNIQAGQILNEGSTNYLVCPEVFRTGLTDYFAVRLA
Physico‐chemical
properties
protein length:274 AA
molecular weight: 30256,45700 Da
isoelectric point:6,69531
aromaticity:0,12774
hydropathy:-0,27007

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNM19634.1
1 274
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1222
Central domain 11 209 200 0,0017
C-terminal 210 274 64 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-274

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VhaS_R31B
[NCBI] 		3384839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNM19634.1 [NCBI]
Genbank nucleotide accession
PQ614275 [NCBI]
CDS location
range 29958 -> 30782
strand -
CDS
ATGGCATATCAAACGGGTACAGCAACGAACTATAAAGATGTTCTTGCAAAGCTGCGCACGTTTGCCACTGCAAACGGTTGGACTGCTAAAAAGTGGTCCAACCCTGCAAGCGGTGAGCACGAATTGGTGTTGTTCTCCAATGGTGACGCAGGAAATGAAAGTATTCACGTCGGGTACATGACCCATACAGTAGATGCGAGTGATGTATTTAACATTAAGGTGTGGAGTGCGGTAAGTTACGTCACAGGTACGGACTTTGACAACGTTGCGGGTAAGTCGCCGAGCCGTTGTATCGGGGCGTGGAACGCAGCAATGCCCTATCACTTTGTGGTCACAAAGCAGAGCATTATGGTGGTGTTGCGCGTAAGTACAGCGTTCCACTATGCGTACTTGGGGCACATCCGCCCTTATACCTCACGCGGACACTGGCCGTCGCCCTTGTGCAGTGCCGCATCTTGCTCTAACCATAACTTGCGTTGGTCGGATACTACGAGCAAAAGTGGTTCCATTCAGCGCCCACGCTCAGACAATTACGTTGTAATCCGTAATGATGCGGGTGATTGGGTAAACGTGACCACAATGTTCCCTATTACTAGCGGTGGTCCGATTTACGATTCTGGTGATTACCCTAGTGGTAATAAAATCATGCAGAAATACATCTGGTTCGATGCGGAATGCTATGGTGAACCTGAAGGTATTTATTACGTCCAAGGTAGTAACATTCAGGCGGGGCAAATCCTCAATGAGGGTTCAACTAACTACTTGGTGTGCCCGGAGGTGTTTCGAACTGGTCTAACCGACTACTTTGCTGTGAGGCTTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9da2eeadd19936c50351faee39a7304d4334e62f5f942bf7c3b912a1475093fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7908
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50