Protein

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Genbank accession

YP_009213007.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,78

Evidence RBPdetect2

Probability 0,96

Protein sequence

MTGPQVVGKTILELDMLTGQIDAANSYIEVHVVGQAASVKVPLGGVTVNGKSAYEVAVAAGYIGTQAQWLSSLQGQNGKSAYQSALDQGYAGTEAAWVTSLKGAKGDQGIQGPAGVKGDTGATGQSAYEAAVAGGFVGDMATWVASLKGTKGDTGAAGAAGTNGKSAYEVAVADGFVGDEPTWLLSLHGKSAYEDAVNQGFVGDLNAWLATLKGPKGDTGTPGATGPAGQSSVLGHLVGSVNTSADLPDPSGFLQSDYFFVGTHVWMNLNGAWTDMGNFQGTPGKDGSGITVLGSLPSPDYLPVSGQRNGDAWLIGTVMYVWQGTTWQLQGQQGLKGDTGAVGPVGPQGQSAWDVVRAQHPEINTLPLFISYITGPQGVKGDTAISFVADGTVATVGALPATGTNNHGYLVGDDTNGYDFHVWINSQFVNLGRNVGPKGDTGAAGATGPQGPAGLPMKAKGTLANTGLLPTTGQTVGDTYSIAGHLWTWDGAVFVDQGNFTGPAGVTGPQGPVGQPVNAKGSLPAVANLPTTGNANGDAYEIGGFIYVYNSTSAQFVNMGQWRGANGTNGTNGLSAYQQAQAAGFAGTVTEWLASLKGADGVSFTYIGQFANAAALPTGTHTGAAATTADTNHIYLWDATNGWKDNGQIGVQGPQGLQGPVGADGKSAYDVAVAGGFAGTQAQWLASLKGLQGDSAYTVAVAQGFVGNVTAWLASLVGPKGDQGIQGIQGIQGATGATGAAGANGTSLAYIGDYASAAAIPAGSLSKVATAAGHIFIHNGTAWIDAGPVAQGPQGIQGVQGNTGATGATGQSAYQAAVAGGFVGTQAQWLASLVGPTGNSAVQDAILAGKLQPGATINDYITLTTGPQGPAGATGATGATGQTGPAISIIGQLSDSSLLPATGTAGTGYAIPDSASPGTYNCWIWLSTTSQWFNLGHVVGAQGPQGVQGLRGLQGLTGPAGPTGPQGSLWIVLTRDPQAQDGNVGDYYFNSNTQQFFRKTSVSTWAPLGYIGGGNLNAPAATGKFRAYNDSGWADLPDVVNNLPVDATGQKVYALKAGEWIEQTLLDSIPTDTGTYILKSGVWTRLDTYTLKAVDAAISAGAVTLDLSVARTFRIQNTAAAAITMTNLPAADRTTTVIVKIYGKTNAMTWTNTIRWFDGSAPPLTNSTTTVVLNWDGTEWVGSVPN

Physico‐chemical properties

protein length:	1186 AA
molecular weight:	119953,30260 Da
isoelectric point:	4,78587
aromaticity:	0,08432
hydropathy:	-0,06206

Domains

Domains [InterPro]

DC_1967
ATT
3–78

DC_1967 IPR050149

DC_1725
STR
74–124

DC_1725 DC_2121 DC_1158 G3DSA:1.20.5.320

DC_2121
ATT
110–164

DC_2121 DC_0108 G3DSA:1.20.5.320 DC_0449

DC_1725
STR
759–933

DC_1725

YP_009213007.1

1 1186

Architecture

ATT

STR

ATT

STR

RBD

ATT 3-78 | STR 79-109 | ATT 110-190 | STR 191-933 | STR 940-996 | RBD 997-1186

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1967	ATT	DC_1967	3	78	Novel HMM	DC_1967	N-terminal	Low	Positional only	47 proteins / 47 hits
DC_1725	STR	DC_1725	74	124	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
IPR050149	Unmapped	-	87	978	InterPro	Collagen superfamily	-	-	-	-
DC_2121	ATT	DC_2121	110	164	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_2121	ATT	DC_2121	154	190	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_0108	STR	DC_0108	188	542	Novel HMM	DC_0108	Central	Low	Positional only	22 proteins / 22 hits
DC_1158	STR	DC_1158	495	802	Novel HMM	DC_1158	Central	Low	Positional only	8 proteins / 8 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	717	760	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1725	STR	DC_1725	759	933	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	940	996	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_0449	RBD	DC_0449	956	1186	Novel HMM	DC_0449	C-terminal	Low	Positional only	30 proteins / 30 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Ralstonia phage RSL2 [NCBI]	1585840	Uroviricota > Caudoviricetes > Chimalliviridae > Chiangmaivirus RSL2 >
Host	Ralstonia [NCBI]	48736	Bacteria > Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae >

Coding sequence (CDS)

Genbank protein accession

YP_009213007.1 [NCBI]

Genbank nucleotide accession

NC_028950.1 [NCBI]

CDS location

range 151337 -> 154897
strand -

CDS

ATGACGGGTCCTCAAGTGGTGGGTAAAACCATCCTCGAACTTGACATGCTGACTGGCCAGATCGACGCTGCGAATTCGTACATCGAAGTGCATGTGGTCGGTCAGGCGGCTAGCGTGAAGGTTCCCCTGGGTGGTGTAACGGTGAACGGCAAATCGGCCTATGAGGTCGCTGTCGCTGCCGGTTACATCGGCACTCAGGCTCAATGGTTGTCGAGCCTTCAAGGGCAAAACGGTAAGTCCGCTTACCAGTCGGCTCTCGATCAAGGCTATGCTGGTACCGAAGCTGCCTGGGTTACCTCGCTCAAGGGAGCAAAGGGTGACCAAGGTATCCAAGGTCCCGCAGGTGTTAAGGGTGATACCGGTGCTACCGGTCAAAGCGCTTACGAGGCCGCTGTTGCCGGTGGTTTCGTCGGCGACATGGCTACGTGGGTTGCTTCGCTCAAAGGCACCAAAGGTGACACCGGTGCTGCTGGTGCAGCTGGTACGAACGGTAAGTCGGCTTATGAAGTTGCCGTGGCTGATGGTTTCGTTGGTGATGAACCGACGTGGCTGCTTTCGTTGCATGGCAAATCTGCATACGAAGACGCAGTCAACCAAGGCTTTGTCGGCGATCTGAACGCCTGGCTGGCAACCCTGAAAGGTCCGAAGGGTGATACCGGTACTCCTGGCGCTACCGGTCCTGCTGGTCAAAGCTCGGTGCTCGGCCATCTCGTTGGTTCGGTGAATACGTCGGCTGATCTGCCGGATCCCTCGGGCTTCTTGCAATCCGACTACTTCTTCGTCGGCACTCACGTCTGGATGAACCTGAACGGTGCCTGGACGGACATGGGGAATTTCCAGGGGACGCCTGGTAAGGACGGCTCGGGCATCACGGTGCTCGGTTCGCTTCCTTCGCCCGACTACCTGCCTGTCTCCGGCCAACGCAATGGCGATGCCTGGCTGATCGGCACTGTCATGTATGTGTGGCAGGGCACGACCTGGCAGCTGCAAGGTCAGCAAGGTCTCAAGGGCGACACCGGTGCAGTTGGTCCGGTTGGGCCGCAAGGTCAATCGGCATGGGATGTCGTTCGTGCTCAGCATCCGGAAATCAACACGTTGCCGCTGTTCATCTCGTACATCACTGGCCCGCAAGGCGTCAAGGGTGATACGGCGATCTCGTTCGTGGCTGACGGTACGGTGGCGACGGTGGGCGCTCTGCCTGCAACTGGCACCAACAACCATGGCTATCTGGTCGGTGACGACACGAACGGCTATGACTTCCATGTCTGGATCAACTCGCAATTCGTGAACCTCGGCCGCAACGTGGGTCCGAAGGGCGATACGGGTGCAGCTGGTGCAACGGGTCCTCAGGGTCCCGCAGGTCTTCCGATGAAAGCGAAGGGTACCCTCGCCAACACTGGATTGCTGCCGACTACGGGTCAAACCGTGGGCGACACGTACTCGATCGCTGGTCACCTCTGGACGTGGGACGGCGCGGTATTCGTCGACCAAGGCAACTTCACGGGTCCCGCCGGTGTAACTGGCCCGCAAGGTCCTGTTGGTCAACCCGTCAACGCTAAGGGTTCGCTCCCGGCTGTGGCAAACCTTCCGACGACTGGCAACGCCAATGGCGATGCTTACGAAATCGGTGGTTTCATCTACGTCTACAACTCGACGAGCGCTCAGTTCGTCAACATGGGTCAATGGCGTGGTGCAAACGGTACGAACGGCACCAACGGTCTGTCGGCTTATCAGCAAGCGCAAGCTGCTGGTTTCGCAGGCACCGTGACGGAATGGCTGGCATCGCTTAAGGGCGCAGATGGCGTGAGTTTCACGTACATCGGTCAGTTTGCGAACGCTGCGGCTCTTCCGACTGGCACGCATACGGGTGCTGCTGCTACCACGGCAGATACCAACCACATTTACTTGTGGGATGCAACCAACGGCTGGAAAGACAACGGTCAAATCGGTGTGCAGGGTCCGCAAGGCTTGCAAGGTCCGGTGGGTGCCGATGGTAAGTCCGCCTACGATGTCGCAGTGGCGGGCGGCTTTGCTGGTACCCAGGCTCAGTGGTTGGCTTCGCTTAAGGGCCTGCAGGGCGACAGCGCTTATACGGTTGCTGTAGCCCAAGGCTTCGTAGGCAATGTCACCGCATGGCTTGCTTCGCTGGTTGGTCCTAAGGGCGACCAAGGTATCCAGGGCATCCAGGGCATTCAAGGTGCTACGGGTGCTACTGGCGCTGCCGGTGCGAATGGTACGAGTCTCGCGTACATCGGCGACTATGCTTCGGCTGCAGCTATTCCGGCAGGTTCTCTGTCGAAAGTGGCGACCGCTGCTGGTCATATTTTCATCCACAACGGCACGGCCTGGATCGATGCAGGTCCGGTTGCTCAAGGACCGCAAGGGATTCAAGGTGTCCAAGGTAACACTGGCGCAACTGGCGCAACTGGCCAATCAGCCTACCAGGCGGCCGTCGCTGGCGGATTTGTGGGTACGCAAGCCCAGTGGCTCGCCTCGCTCGTCGGTCCTACCGGCAATTCTGCGGTCCAGGACGCCATCCTCGCAGGAAAGCTCCAACCCGGAGCAACCATCAACGACTACATCACCCTGACGACTGGTCCGCAAGGTCCCGCAGGTGCAACTGGTGCGACCGGTGCTACTGGTCAAACTGGTCCGGCGATTTCGATCATCGGTCAGTTGAGTGATTCGTCCCTGCTCCCGGCAACGGGTACGGCTGGTACGGGTTACGCGATTCCGGATTCGGCTTCGCCTGGTACTTACAACTGCTGGATCTGGTTGTCGACCACTTCGCAGTGGTTCAACCTGGGTCACGTGGTTGGTGCTCAAGGTCCGCAGGGTGTTCAGGGTCTGCGTGGTCTGCAAGGTCTCACGGGTCCTGCAGGTCCGACTGGCCCTCAGGGCTCGCTCTGGATTGTGCTCACGCGCGATCCGCAGGCGCAAGACGGTAATGTCGGCGACTACTACTTCAACAGCAACACGCAGCAGTTCTTCCGGAAAACCAGCGTGTCGACGTGGGCTCCTCTGGGCTACATCGGCGGCGGTAACCTGAACGCTCCTGCGGCCACGGGCAAGTTCCGTGCGTACAACGATTCGGGCTGGGCGGATCTGCCGGATGTCGTGAACAATCTGCCTGTCGATGCGACCGGTCAGAAAGTTTACGCACTGAAGGCTGGTGAATGGATTGAGCAAACGCTGCTCGATTCGATCCCGACCGATACGGGTACGTATATCTTGAAGAGCGGCGTCTGGACTCGTCTGGATACCTACACTCTGAAGGCTGTCGATGCTGCAATCTCCGCTGGCGCAGTTACGCTTGACCTCTCGGTTGCGCGTACGTTCCGTATCCAGAATACGGCTGCTGCTGCAATCACGATGACCAACTTGCCGGCTGCTGACCGGACGACGACCGTTATCGTGAAGATCTACGGCAAGACGAACGCCATGACCTGGACCAACACCATCCGTTGGTTCGACGGCTCGGCGCCTCCTCTGACCAACAGCACGACCACCGTTGTCCTGAACTGGGACGGTACGGAATGGGTCGGCTCGGTTCCGAACTAA

Genome Context

Tertiary structure

PDB ID

a0331a491fdeda29b89790ac257464a37852cc8b795f24e739f236e653525117

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6599

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Genome analysis of a novel jumbo phage RSL2 infecting the phytopathogen Ralstonia solanacearum	Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T.	2010-03	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature