Protein

View in Explore
Genbank accession
YP_009187664.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MPENLSPETGYVFGLRDPVTQRSALRVTTAGTVEIPILSAGQGVITLNNLADEVATLLPESMSAETGYVFGLRDPVTKKYAMLVSVNGTVTMPMLKIPEASVGLTSLDEEMSQLVPVSLSPDTGYVYGLRDPVTLRYALLVAVDGHVTIPLFALGEQVVLMKNLADEVTANIIPVAADVVDARPEPMRAAMAEISVRTIRKAGSGWAQFPSHICKAMIGVNTSGVSLQFRKSAGLQFTGKAFVGAYSPGALQSKVKKGRFTSTPVSTPTGTFNAGDYYTYEVYNSNNNISETTPGTWNGQDIYLGDHLVYDGAAWAIQPSPGRGAQRAPDMYFTITADGWFDAMEVKQGDKLMFLTNQTAGGARLTPTWVAIPSSSDRLFYAGEFTPASLPTDPIKNGVYQATSTGVIGADTYAVGDYGWYDGSGWIKVMNDDVVITVAAGGSVALRCTSNSDEWEVRRTDKNDVPVGVRMKAQVMTLIQEVLGSKQLLIGDSMFGSGSSGTQIISATGVTGEVRSYGGSTSEQVLGMFKKEILSWGDNYKAQTIVVWHGQNNQPSTDLNAAQLREVSMQMAQLAGARDIKTLFLTILGQRTMTWNGTRIVVQQQEDQFAKTGILYELSDWYSRIMPGRYANTYEILLSAATDAIDPTFPGMTEKQVAAKYGILPWSFFNGSTLTGLTTNQLVYKGTWTGTALPTGGSSGDYYLRTDTSSNVGNVIYNSGGTWIENSIDRTHLSNAGGTALCYGGDGFSLGTGYTNVPARDGVADILTKNHFYR
Physico‐chemical
properties
protein length:774 AA
molecular weight: 83238,94610 Da
isoelectric point:5,15867
aromaticity:0,09173
hydropathy:-0,11563

Domains

Domains [InterPro]
DC_0521
STR
43–774
DC_0521
SSF52266
STR
486–598
SSF52266
YP_009187664.1
1 774
Architecture
STR
STR 43-774
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009187664.1
1 774
Domain Start End Length (AA) Confidence
N-terminal 1 542 542 0,8137
Central domain 543 741 200 0,4603
C-terminal 742 774 32 0,8196
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-542
Central
543-741
C-terminal
742-774

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KB57
[NCBI] 		1719140 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus KB57 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009187664.1 [NCBI]
Genbank nucleotide accession
NC_028659 [NCBI]
CDS location
range 34071 -> 36395
strand -
CDS
TTGCCAGAAAACCTTAGCCCGGAAACAGGTTATGTTTTTGGTCTAAGAGATCCTGTTACTCAGAGATCTGCTTTACGGGTAACAACAGCAGGGACGGTAGAGATTCCAATTCTGTCTGCTGGGCAGGGGGTGATTACCCTTAACAACCTCGCTGATGAGGTGGCTACACTCCTTCCTGAAAGTATGAGTGCCGAAACAGGCTATGTTTTTGGTCTAAGAGATCCTGTTACTAAAAAATATGCTATGCTTGTTTCCGTTAACGGAACGGTTACCATGCCAATGCTCAAGATCCCTGAAGCAAGTGTTGGCCTAACTTCTCTCGATGAAGAGATGTCTCAATTGGTTCCTGTATCTCTAAGTCCAGATACTGGGTATGTATATGGCCTAAGAGACCCCGTTACTCTTCGTTATGCCCTTTTAGTTGCAGTTGATGGTCACGTCACTATTCCACTATTCGCCTTAGGTGAGCAAGTGGTGCTGATGAAGAACCTCGCTGATGAGGTAACGGCAAATATCATCCCAGTAGCCGCAGATGTTGTAGATGCCAGACCGGAACCTATGCGTGCAGCAATGGCAGAGATTTCTGTCAGAACTATTCGTAAAGCAGGTTCAGGATGGGCGCAATTCCCATCCCATATCTGTAAGGCGATGATCGGTGTAAATACCTCTGGTGTTTCTTTACAGTTTAGAAAATCAGCAGGTCTTCAGTTCACAGGAAAAGCTTTTGTTGGGGCATATTCTCCTGGGGCATTGCAGTCCAAAGTTAAAAAGGGGCGCTTCACTAGCACTCCGGTAAGCACACCGACGGGAACGTTTAATGCTGGTGACTATTATACCTATGAAGTATATAATAGCAACAATAACATCTCAGAAACGACCCCCGGAACATGGAATGGTCAAGATATCTATCTTGGAGATCATCTTGTTTATGACGGCGCTGCTTGGGCAATTCAACCATCCCCAGGGCGTGGTGCTCAAAGAGCACCTGATATGTACTTTACCATAACTGCCGACGGCTGGTTTGATGCGATGGAAGTGAAACAGGGCGATAAGCTGATGTTCTTGACCAACCAAACTGCGGGTGGTGCTCGACTTACACCAACATGGGTAGCTATTCCAAGCTCCTCAGACAGACTTTTCTACGCAGGAGAATTCACCCCTGCATCTCTACCGACCGACCCAATTAAGAACGGGGTATACCAAGCCACCTCAACAGGAGTAATAGGTGCAGACACCTATGCCGTTGGTGATTATGGATGGTATGATGGTTCTGGATGGATTAAGGTCATGAATGATGATGTTGTGATTACGGTGGCTGCTGGCGGTTCTGTTGCCCTAAGATGCACATCAAATTCTGACGAATGGGAAGTCCGTAGAACAGATAAAAATGATGTTCCGGTTGGTGTCAGAATGAAGGCTCAAGTTATGACACTGATCCAAGAAGTTCTTGGAAGCAAGCAGTTGCTGATCGGCGATTCCATGTTTGGTAGCGGGTCCTCTGGAACACAGATCATTTCTGCAACAGGTGTAACTGGTGAAGTCAGGTCTTATGGTGGTTCTACTTCTGAGCAAGTTCTCGGAATGTTCAAGAAAGAAATTCTTTCTTGGGGAGATAACTACAAGGCACAGACGATTGTTGTATGGCATGGTCAAAATAACCAACCAAGCACAGACCTGAATGCGGCTCAATTACGAGAAGTGTCCATGCAAATGGCTCAACTTGCTGGCGCAAGGGATATTAAGACATTGTTCTTGACTATCCTTGGTCAGAGAACCATGACTTGGAACGGAACACGAATTGTTGTGCAACAACAAGAAGACCAATTTGCTAAAACTGGTATCTTGTATGAGCTTTCTGACTGGTATTCAAGAATCATGCCTGGAAGATATGCCAATACATATGAGATTCTCCTGTCTGCTGCAACAGATGCAATTGATCCTACATTCCCAGGAATGACAGAGAAACAAGTTGCTGCCAAATATGGCATTTTGCCGTGGTCTTTCTTTAACGGTTCCACGCTTACCGGATTAACAACTAATCAGTTAGTGTATAAAGGAACATGGACAGGAACTGCCTTACCAACCGGAGGATCTTCAGGGGACTATTACCTGAGAACAGATACCTCTTCTAATGTTGGTAACGTTATTTATAACTCCGGCGGAACTTGGATCGAAAACTCCATTGACAGAACGCACCTTAGCAATGCAGGAGGCACAGCATTGTGTTATGGTGGAGATGGATTCTCTCTTGGCACTGGCTATACAAACGTTCCTGCAAGGGACGGTGTTGCAGATATTCTTACAAAAAATCACTTCTATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c9e53f9c1de5d3de590a61b57ddfbba8a549b26ad3877365cbaba0bf2faa0dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae bacteriophage vB_KpnM_KB57 Volozhantsev,N.V., Popova,A.V., Krasilnikova,V.M. and Bogun,A.G. 2017-09-14 — GenBank