Protein

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Genbank accession
AGF91590.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGTTLFARLDTIAYNTEYVLYTGSAPSANTYYRVTSLKVDYTNTQGGSAVGSTWDDTNEDGRYAGQLGFSFSGGSAVTIPGGQVATEDVEGTLLINGQSFITSQDPQYQADDSSSTSTSGDGSDFIGYVSDYDTRYTATVTLKNGGIIKGTKAQAEACYIDVVVEGKYYRISVEAVEPVETYQGVSSIAYYKTAQSPDKGRASMATILKGLETAVNSDLANVTAEIYGSGLYLYGSAAPNVNFLGGAVNEAMNVFGNTAQDVARLPSMCKHGYIVQVANSENVDADNYYVKFLADNGSGGSGKWEETVRPHNFSSGSDPMVKGLDPATMPHALVNNRNGTFTFKKLDETTANADNTDNYWKYREVGDDETNPFPSFKGLEIQKIFFHRNRLGFVANEQVVMSRPGDYFNFFVVSAITTSDDNPIDITVSDIKPAFINHVLPVQKGVMMFSDNGQFILFTESDIFSPKTARLKKISSYECDDALQPVDMGTSVMFSSSVSAYTRTYEATVVDDDVPPKIVEQTRVVPEFLPKTVDTTANTTSLGIVSYGETNTNELYHYKYFDSGERRDQSAWYSWTLQGTLQYMVYTAGTFYVVTKQDNDYILCRHEYVTDATSARTYVVGGVAADVGSPLKTARWFEGCLDNMTIPTAITYTAQGGSVTGPDFTDLTIPYTPTSADNLYAVALSGTDTAGNDVAGTVIKATSVGTNKATFEGVNMTGWTVAVGYRYTTTVELPNYYMSVEAGKYDVDADLRISGINFEMGISGPMEFHLSSIYADMNDYVQYESGMKLDDSDFGKPPSKTSKSVRVPVQKKNEKYNLTIKIPDPFSTALISASWDGIYNQRRHARK
Physico‐chemical
properties
protein length:847 AA
molecular weight: 92508,41450 Da
isoelectric point:4,68719
aromaticity:0,11334
hydropathy:-0,33105

Domains

Domains [InterPro]
DC_0058
STR
4–847
DC_0058
IPR058003
TTP
158–844
IPR058003
AGF91590.1
1 847
Architecture
STR
STR 4-847
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGF91590.1
1 847
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,9707
Central domain 39 280 243 0,6420
C-terminal 281 847 566 0,2934
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-280
C-terminal
281-847

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP6
[NCBI] 		382275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGF91590.1 [NCBI]
Genbank nucleotide accession
HQ634152 [NCBI]
CDS location
range 26303 -> 28846
strand -
CDS
GTGGGGACTACGCTTTTTGCTAGGTTAGATACTATTGCTTATAATACTGAGTATGTATTATATACAGGTTCTGCACCGTCTGCTAATACTTATTATCGAGTAACTTCTTTAAAAGTAGATTATACTAATACCCAAGGTGGTAGTGCTGTGGGTAGTACATGGGATGATACTAATGAAGATGGTAGATATGCTGGACAATTAGGTTTTTCGTTTTCAGGAGGTAGTGCTGTAACTATTCCTGGAGGACAGGTAGCCACAGAAGATGTAGAAGGTACATTACTAATTAATGGTCAATCATTTATTACTTCACAAGATCCTCAATATCAAGCTGATGATTCTAGTTCAACATCTACTTCAGGAGATGGATCTGACTTTATTGGTTATGTTTCCGATTATGATACACGATACACAGCTACAGTTACATTAAAAAACGGTGGTATAATTAAAGGTACTAAAGCACAAGCTGAAGCATGTTATATTGATGTTGTTGTAGAAGGTAAATATTACCGTATTTCAGTAGAAGCTGTAGAACCTGTTGAAACATATCAAGGTGTTTCTAGTATTGCATACTACAAAACAGCACAAAGTCCAGATAAAGGTAGAGCTAGTATGGCTACTATCCTTAAAGGATTGGAAACTGCTGTTAATAGCGATTTAGCTAATGTTACTGCTGAAATATATGGTTCAGGTTTATATTTATATGGTAGTGCAGCTCCTAATGTAAACTTTTTAGGAGGTGCTGTGAATGAAGCTATGAACGTGTTTGGTAACACAGCACAAGATGTAGCTCGTTTACCATCTATGTGTAAACATGGTTATATAGTACAAGTAGCTAATTCAGAAAACGTAGATGCTGATAATTATTATGTAAAATTTCTAGCTGATAACGGTTCAGGTGGTTCAGGTAAATGGGAAGAAACTGTAAGACCACATAACTTCTCATCAGGTAGTGACCCTATGGTTAAAGGATTAGATCCTGCTACTATGCCACACGCTTTAGTTAATAACCGTAACGGTACTTTTACTTTTAAAAAGTTAGACGAAACTACAGCTAATGCTGATAATACAGATAATTATTGGAAGTACAGAGAGGTAGGTGATGATGAGACTAACCCATTTCCTAGTTTTAAAGGCTTAGAAATTCAGAAAATATTTTTTCACAGAAACAGATTAGGTTTTGTTGCAAACGAGCAAGTAGTAATGAGTCGTCCTGGAGATTATTTTAATTTCTTTGTTGTCTCTGCGATTACTACAAGTGATGATAATCCTATTGATATTACAGTATCTGATATTAAACCTGCATTTATTAATCATGTCTTGCCTGTTCAAAAAGGTGTGATGATGTTTAGTGATAACGGTCAGTTTATATTATTTACTGAATCTGATATATTTAGTCCTAAAACAGCAAGGCTGAAAAAGATATCTAGCTATGAATGTGATGATGCTTTACAACCTGTAGACATGGGAACTTCAGTTATGTTTAGCTCGTCTGTATCTGCATACACTAGAACGTATGAAGCTACTGTTGTAGACGATGATGTACCTCCAAAAATAGTAGAGCAAACACGAGTAGTTCCTGAATTTTTACCAAAAACTGTTGATACTACAGCTAACACAACCTCTTTAGGTATAGTTAGTTATGGTGAAACAAATACAAACGAGTTGTATCATTATAAATATTTTGATTCAGGAGAACGTAGAGATCAATCTGCATGGTATTCATGGACATTACAAGGTACATTACAGTATATGGTATATACTGCTGGTACTTTCTATGTTGTCACTAAACAAGATAATGATTATATATTATGTAGACATGAATATGTCACAGATGCTACATCTGCTCGAACATATGTTGTTGGTGGAGTAGCTGCTGATGTAGGTTCTCCGTTAAAAACAGCTAGATGGTTTGAAGGTTGTCTAGATAACATGACTATACCAACTGCTATAACTTATACAGCTCAAGGAGGTTCAGTAACAGGACCAGATTTCACTGATTTAACTATACCTTATACTCCAACTTCAGCTGATAATTTATATGCTGTAGCTCTTTCTGGAACAGATACAGCTGGAAATGATGTTGCTGGTACGGTAATTAAAGCTACTTCTGTAGGTACTAATAAAGCCACGTTTGAAGGAGTCAATATGACTGGATGGACAGTAGCTGTAGGTTATAGATATACAACAACAGTAGAGCTACCTAATTACTATATGTCCGTAGAAGCTGGTAAATATGATGTAGATGCTGACTTAAGAATTTCTGGAATAAATTTTGAAATGGGTATTTCTGGTCCTATGGAGTTTCATTTATCTTCTATCTATGCAGATATGAATGATTACGTTCAATATGAATCTGGTATGAAACTAGATGACAGTGACTTTGGTAAACCACCTTCTAAAACATCTAAGTCAGTGAGAGTACCAGTACAGAAAAAGAATGAAAAATATAATCTTACTATAAAAATACCTGATCCTTTTTCCACCGCTTTAATCTCAGCAAGCTGGGATGGCATTTATAACCAACGAAGACATGCACGAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e15b07260d69f51bf8a7b3c2bec6ba6de92540487fe3029a532907c550c398f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6429
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP6 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank