Protein

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Genbank accession
UYD21515.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNLKSDKDVKIYRYPSTDQGTLGRMILPNGKEIVSLELPDRDNKVRVSRIDAGRYRCTKWRSKKFGNVWILHGTNGRTYILIHKGNVAGDTDKGYRTHSAGCILVGMSAGTLYGQLACLSSAQALRECHKALDQYDEFYINIEDY
Physico‐chemical
properties
protein length:145 AA
molecular weight: 16406,51840 Da
isoelectric point:9,17400
aromaticity:0,08966
hydropathy:-0,53034

Domains

Domains [InterPro]
IPR043732
STR
11–133
IPR043732
UYD21515.1
1 145
Architecture
STR
STR 11-133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 29Fa.3
[NCBI] 		2985667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD21515.1 [NCBI]
Genbank nucleotide accession
OP547478.1 [NCBI]
CDS location
range 35745 -> 36182
strand +
CDS
ATGAATTTGAAGTCTGATAAGGACGTTAAGATCTACCGATACCCAAGCACTGACCAAGGTACTTTAGGGCGAATGATATTACCTAATGGCAAAGAGATCGTTAGTCTTGAGTTACCGGATCGAGATAATAAAGTCAGGGTTAGCCGGATTGATGCGGGGCGTTATCGTTGTACTAAATGGCGCTCTAAAAAATTTGGCAACGTGTGGATCTTGCACGGCACTAATGGGCGCACATACATCCTAATCCATAAGGGCAATGTCGCCGGAGACACGGATAAGGGTTACCGTACCCACTCCGCGGGGTGTATCTTAGTCGGTATGAGTGCGGGCACTTTATACGGGCAATTGGCTTGCTTATCGAGTGCGCAGGCTTTGCGCGAGTGTCATAAGGCGCTTGATCAGTACGATGAGTTTTATATAAACATAGAGGACTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d58000cdc0ba30a20cc6255ab8a3926d3fbd305f701017339ead51502c8fa9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Coastal water bacteriophages infect various sets of Vibrio parahaemolyticus sequence types Brossard Stoos,K.A., Ren,J., Shields-Cutler,R.R., Sams,K.L., Caldwell,S., Ho,M.B., Rivara,G., Whistler,C.A., Jones,S.H., Wiedmann,M., DeMent,J., Getchell,R.G. and Marquis,H. 2022-12-19 — GenBank