Protein

View in Explore
Genbank accession
APZ82129.1 [GenBank]
Protein name
tail endopeptidase
RBP type
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MLFLLDKDVRTVKWNGIPLHEASSAIVKEETNSDFYLTVRYPITDSGIYQLIKEDMLIKAPTPVLGAQLFRIKKPIENDDSLDITAYHVSDDIMKRSITPVSVVGQGCAMALSQMVQNAKTGLGDFSFTSDIMDSRTFNTTETKTLYSVLMDGKHSIVGTWEGELVRDNFALSIKRSRGADRGVVITTHKNLKSYQRTKNSQGVVTRIHARSTFKPDGAEDEVTLRVSVDSPLINSYPYINEKEYENNNAETVEDLRKWAEAKFTNEGIDKVSDAIEIEAYELDGQVVNLGDTVNLKSRKHSADLYKKAIAYEFNALTEEYISITFDDKPGVGGSGVSSGLSNVADAILVASATAQDVAVQRAVKNANAAFDAEFGKTKTKINDDIEIAKAKVESFKSELSNRMDNQLLPLATEAKNLASQAQADLTRKEIELRAELNRQVTSTEAVKISLTNLSHNMDIIKQKALNDLRDAETRLKEADSVQQLATKRVEDKLTGLSTKLESFSVGGYNYVIDGGEPKELMANFYGKTYDINPQLLERTSQATLSFSYEAESTSRLEVRLYKKMHTGDTSKITIIVMPNFDLSPGKGFISQSFDLGGVMPDPRNQAWLVMRGTNANPLTLSKVKLERGTVATDWNNRDETLKASFAEYKQTVDENLANLRTSTETLAGQLTSAESSIRQTSESFSNRLVSLETYKDSESNRASRYFEASKSETAKQLSALRTEVNGSYVDKSTYEENARGLTRRFESLSSGTQNYALGTERDVYLNVSGTTVYDLYSFGTTLAIKGIEMGDTVTIAFNYFADSRTAFGSYELELYGHAGKIERVGEVQRTISNRGTYTASFVANNANFRANSLKIRFTDSRLKFRVTTLRVTKGTIPADWSPSPDDLKAYSDTKLEQTANEIKASVTSLDHKTLKQTDITMTSEGIVLRAGKTSNDVARAIGSYFKVTPDAIALFSSLIKVSGNMLVDGSVTSRNLVTGAVETGHVKAGAITGVLLAAEAVTAEKLKVDQAFFNKLMANDAYLKQLFAKSAFITQVQSVTISASQISGGVIKALNNAMEIQMNSGQILYYTDQAALKRVLSGYPTQFVKFATGTVSGKGNAGVTVIGSNRYGTESTNDGGFVGVRAWNGSNIDSLDLVGDKIRLASSAFDNSDGWDVRTLDSGLKITPHNRAAERNSRIEVGDVWILKGNGSYSSLRDILNSFNENFSKGPNADSYTYYHSGF
Physico‐chemical
properties
protein length:1224 AA
molecular weight: 134432,04090 Da
isoelectric point:6,01012
aromaticity:0,07925
hydropathy:-0,37475

Domains

Domains [InterPro]
DC_1274
ATT
1–578
DC_1274 DC_0171
IPR007119
Unmapped
28–327
IPR007119 Coil Coil
IPR010572
ENZ
98–327
IPR010572
APZ82129.1
1 1224
Architecture
ATT
RBD
ATT 1-578 | RBD 637-1219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Str03
[NCBI] 		1933693 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APZ82129.1 [NCBI]
Genbank nucleotide accession
KY363359 [NCBI]
CDS location
range 12092 -> 15766
strand +
CDS
TTGCTCTTTTTACTTGATAAAGATGTTAGAACGGTCAAATGGAATGGCATTCCACTTCACGAGGCCAGCTCTGCCATTGTCAAAGAAGAAACCAACAGTGATTTCTACCTGACTGTTCGCTATCCTATCACGGATTCAGGTATCTATCAACTTATCAAAGAGGATATGCTGATTAAGGCGCCTACGCCTGTGCTGGGTGCTCAGCTGTTTAGAATCAAGAAACCTATTGAGAATGATGATAGCTTGGATATCACTGCTTATCATGTTTCTGACGACATCATGAAGCGGTCTATCACTCCTGTAAGTGTAGTTGGTCAAGGTTGTGCTATGGCACTGTCTCAGATGGTTCAAAATGCTAAGACTGGTCTAGGTGATTTTTCGTTCACCAGCGATATTATGGACAGCAGAACCTTCAACACGACAGAGACGAAAACACTGTATTCAGTCCTTATGGACGGTAAACACAGCATTGTTGGAACGTGGGAGGGTGAGCTTGTCCGTGACAATTTTGCTCTTTCTATCAAGCGTAGCCGTGGGGCTGATCGTGGTGTTGTCATCACAACACACAAGAACCTCAAATCCTATCAACGAACCAAGAACTCTCAGGGTGTTGTCACAAGGATTCATGCACGGTCAACCTTCAAACCTGATGGAGCTGAAGATGAAGTGACGCTCAGAGTGTCTGTTGACAGTCCACTAATAAACTCTTATCCCTACATCAATGAGAAAGAGTATGAGAACAACAACGCTGAAACCGTTGAAGACCTTAGAAAGTGGGCTGAGGCTAAGTTTACAAATGAGGGCATTGATAAGGTTTCTGATGCCATTGAGATTGAAGCCTATGAGCTTGACGGTCAAGTTGTAAATCTGGGCGACACGGTTAACCTCAAGAGTAGAAAGCACAGTGCTGACCTCTACAAGAAGGCCATTGCCTACGAGTTTAACGCTTTAACGGAAGAGTATATCTCCATAACTTTTGATGATAAGCCAGGAGTTGGTGGTTCTGGGGTGTCAAGTGGCTTGTCTAATGTTGCTGATGCTATACTTGTAGCAAGTGCCACAGCTCAGGACGTTGCTGTTCAAAGGGCTGTGAAAAATGCTAACGCTGCCTTTGATGCAGAGTTTGGTAAAACAAAAACAAAAATTAATGATGATATCGAAATCGCAAAAGCCAAAGTAGAAAGCTTTAAATCGGAACTATCTAATCGCATGGATAATCAGCTTCTTCCCCTTGCGACAGAAGCTAAGAATTTAGCCAGTCAGGCACAAGCAGACCTGACCAGAAAAGAAATAGAGCTTCGAGCTGAATTAAATAGACAAGTCACAAGCACAGAAGCTGTAAAAATCTCTCTAACAAATCTTAGTCACAATATGGATATCATTAAGCAAAAAGCCCTAAACGACCTTAGAGACGCAGAGACAAGGCTAAAGGAAGCTGATAGCGTCCAACAACTTGCGACAAAGCGGGTTGAGGATAAACTGACAGGACTTAGCACGAAACTGGAGTCATTCTCTGTTGGTGGCTATAATTATGTCATTGACGGCGGAGAACCTAAAGAACTAATGGCTAACTTCTATGGTAAGACCTATGATATTAATCCCCAACTACTCGAACGAACTAGTCAAGCGACCTTGAGTTTTAGCTATGAAGCAGAATCAACTAGTCGTTTAGAAGTTAGACTTTATAAAAAGATGCACACCGGGGACACTAGTAAGATTACAATTATTGTCATGCCTAACTTTGACTTATCTCCAGGGAAAGGATTTATCTCTCAGAGCTTTGATTTAGGTGGTGTTATGCCTGACCCTAGAAACCAAGCCTGGCTTGTGATGCGGGGGACAAATGCTAACCCCTTGACGCTCTCGAAAGTTAAGCTGGAACGTGGTACCGTTGCTACAGACTGGAATAATCGCGATGAAACCTTAAAAGCTAGCTTCGCCGAATACAAGCAGACCGTTGATGAAAACTTAGCCAACCTTAGAACAAGTACGGAAACCTTGGCAGGTCAACTGACAAGTGCTGAGTCTAGCATTAGGCAGACGTCGGAATCCTTTAGCAATCGTTTGGTTAGTCTTGAGACCTATAAAGATAGTGAATCAAATCGAGCTAGTCGTTACTTTGAAGCAAGCAAGTCTGAAACCGCTAAGCAGCTATCAGCCTTACGAACAGAAGTTAATGGCTCTTATGTGGATAAGTCAACCTATGAGGAAAATGCAAGAGGTTTGACAAGACGCTTTGAAAGTCTGTCATCAGGGACACAGAACTATGCTTTGGGGACTGAAAGAGATGTCTATCTAAACGTTTCAGGGACTACCGTCTATGACCTTTATAGCTTCGGCACTACCTTAGCAATAAAAGGGATTGAAATGGGAGATACTGTAACTATTGCATTTAACTATTTTGCGGATAGTCGGACGGCTTTTGGTTCTTATGAACTGGAGCTATACGGACATGCAGGCAAAATCGAACGGGTTGGTGAGGTACAGAGAACGATATCAAATCGTGGTACCTATACCGCATCTTTTGTGGCAAACAATGCCAATTTCAGGGCAAACTCCCTTAAAATTAGATTTACGGATAGCCGACTTAAGTTTAGAGTGACAACACTTCGTGTGACTAAGGGGACAATTCCTGCGGACTGGAGTCCATCTCCAGATGACCTAAAAGCCTACTCGGATACTAAGCTTGAACAGACAGCTAATGAGATTAAAGCTAGTGTAACAAGTCTTGATCATAAAACTCTTAAGCAAACTGATATTACTATGACTTCTGAAGGGATTGTCCTAAGAGCAGGCAAGACGAGTAATGATGTGGCAAGAGCTATTGGCTCTTACTTTAAGGTCACTCCTGATGCTATAGCTCTGTTTAGCTCACTGATAAAAGTTAGCGGGAACATGTTGGTTGATGGTTCTGTAACTAGTCGTAATTTGGTAACAGGCGCTGTCGAAACGGGACATGTTAAGGCTGGAGCAATCACAGGAGTGCTTTTAGCAGCTGAAGCTGTAACGGCAGAAAAACTTAAAGTCGACCAAGCTTTCTTTAACAAGTTGATGGCCAACGATGCCTACTTGAAGCAACTATTTGCCAAGTCAGCCTTCATCACTCAGGTTCAATCCGTGACAATATCTGCCAGTCAGATTTCGGGCGGTGTTATTAAAGCTTTGAATAATGCCATGGAAATCCAGATGAACAGTGGTCAGATACTTTACTACACTGACCAAGCTGCACTGAAACGGGTTTTGAGTGGCTATCCTACTCAGTTTGTTAAGTTTGCAACTGGTACAGTATCTGGTAAAGGAAATGCTGGTGTTACGGTCATTGGTTCTAACCGCTACGGTACAGAATCAACCAATGATGGTGGATTTGTTGGAGTCCGTGCATGGAACGGCTCAAACATTGACTCACTTGACTTAGTTGGTGATAAAATCCGATTAGCAAGCTCTGCCTTTGACAATTCAGATGGTTGGGATGTTCGGACACTTGATTCAGGCTTGAAAATCACACCACACAATAGGGCTGCTGAACGCAATAGCCGAATTGAGGTTGGTGATGTCTGGATTTTAAAAGGAAATGGATCCTATTCTTCTCTCAGAGATATTTTGAACTCATTCAATGAGAACTTCTCAAAAGGCCCAAATGCTGACTCTTACACTTACTACCATTCGGGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90595293417373e3f95027045884242deeeef021f545a239ea795f96ce8b2247
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic perspective on the phages infecting Streptococaccae Harhala,M., Barylski,J., Huminska,K., Dorota,L., Wojciechowicz,J., Wojtyna,K., Kus,M., Hodyra-Stefaniak,K., Kropinski,A. and Dabrowska,K. 2020-06-01 — GenBank