Protein

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Genbank accession
WLJ71135.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MAFRNHYSIGRGKFYFREFEPGTLTPSGNFRRLGNVPDASVTQAFDKIERWDCENGVNVKDGQKNIGRDTSLAFTTDNVSLANLALWFGTGVDTIETEEEADAEEIISGVVLGTFYQLGASPDRLQGARNVSGVSVVTAGGDVLVAGHDYRVHPKHGLLEMLENSALYGGEEIVVTYTVAAGSRRVVLSGGRMAQGQLRFISDNIAGANRDIFWSRVTVAPAGDYTLIGSDWQSVGFSVAILSGSGTPYMTVAEDPDETAFPRIVNLDARVNTTRFKAITVKTAKRSDVLRLALPPGLRWVSYAPANVPSPADPATLKGTWNNFSVIKDGNPATIQMIGTKVFHDGYEAARAAFVPVTITGARSYTFFIDDNPNTDNIGGLSIRVSLVGSD
Physico‐chemical
properties
protein length:391 AA
molecular weight: 42124,70410 Da
isoelectric point:5,38597
aromaticity:0,09207
hydropathy:-0,12788

Domains

Domains [InterPro]
PF27730
STR
7–243
PF27730
WLJ71135.1
1 391
Architecture
STR
STR 7-243 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WLJ71135.1
1 391
Domain Start End Length (AA) Confidence
N-terminal 1 267 267 0,9228
Central domain 268 380 114 0,2027
C-terminal 381 391 10 0,4261
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-267
Central
268-380
C-terminal
381-391

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphingomonas phage Carli
[NCBI] 		3065695 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sphingomonas sp. LR55
[NCBI] 		3050231 Pseudomonadota > Alphaproteobacteria > Sphingomonadales > Sphingomonadaceae > Sphingomonas >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLJ71135.1 [NCBI]
Genbank nucleotide accession
OR225223 [NCBI]
CDS location
range 32687 -> 33862
strand +
CDS
GTGGCATTTCGGAACCACTACAGCATCGGGCGAGGCAAGTTCTATTTCCGTGAGTTCGAGCCGGGCACGCTCACCCCGAGCGGCAACTTTCGTCGGCTTGGAAACGTGCCCGATGCCTCGGTGACGCAGGCGTTCGACAAGATCGAACGGTGGGACTGCGAGAACGGCGTAAACGTCAAGGACGGGCAGAAGAACATCGGGCGGGATACCTCGCTGGCGTTCACCACCGACAACGTGTCGCTCGCCAATCTGGCGCTATGGTTCGGGACCGGGGTCGATACTATCGAGACCGAGGAGGAAGCCGACGCAGAGGAAATCATTTCCGGCGTGGTCCTCGGCACGTTCTACCAGTTGGGGGCCAGCCCCGACCGGCTGCAAGGCGCTCGCAACGTGTCCGGGGTGTCCGTGGTGACCGCAGGCGGCGACGTGCTGGTGGCCGGACATGACTACCGCGTGCATCCCAAGCACGGACTGCTGGAGATGCTGGAGAACTCGGCCCTCTACGGCGGCGAGGAGATCGTGGTCACCTACACCGTGGCCGCAGGGTCTCGACGGGTCGTGCTGTCCGGTGGCCGGATGGCGCAGGGCCAGCTACGATTCATCTCGGACAACATCGCCGGGGCGAACCGCGACATTTTCTGGTCGAGGGTCACCGTGGCCCCGGCTGGCGATTACACGCTCATCGGATCGGACTGGCAATCGGTCGGGTTCTCTGTGGCGATCCTGTCCGGCAGCGGCACGCCCTATATGACCGTGGCCGAGGACCCCGATGAGACGGCGTTTCCAAGGATCGTCAACCTCGACGCGCGGGTCAACACCACGCGGTTCAAGGCGATCACTGTCAAGACGGCCAAGCGGTCGGACGTGCTGCGGTTGGCGCTACCGCCCGGCCTGCGGTGGGTATCCTATGCCCCGGCCAACGTGCCCTCCCCGGCAGACCCCGCGACCCTCAAGGGCACGTGGAACAACTTTAGCGTCATCAAGGACGGGAACCCCGCCACTATACAGATGATCGGAACTAAAGTATTCCATGACGGATATGAGGCCGCGCGTGCAGCCTTTGTGCCGGTGACGATCACGGGCGCGAGGTCCTACACGTTCTTCATAGACGACAATCCGAACACCGATAACATCGGCGGCTTGTCTATCCGTGTCTCGCTGGTAGGGAGCGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
239fb720583c7f28ee466a991541fa7fdf4ecde24a860bbfdc370b5f29511f8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7170
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel virulent bacteriophage genera target a wheat phyllosphere bacterium of the Sphingomonas genus Riber,L., Carstens,A.B., Dougherty,P.E., Roy,C., Willenbucher,K., Hille,F. and Hansen,L.H. 2023-07-18 — GenBank