Protein

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Genbank accession
AIX21592.1 [GenBank]
Protein name
tail collar domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSQINFPNIPSDGDEFLAPNGTTYQYDSDTGQWKILLGPGADGPKGPIGPEGATGSTGPDGPTGATGTDATRITGEIIAFGGTTVPSGWLECNGQAAPSALAAVLGISNVPDLRGEFIRGFDNGRGVDSGRAILTAQGDEFESHTHIQNSHNHTQNPHTHQANYTPLTYVAGQPQANGLVTAVTALTNISTNTATNIANTATNQSTGGTETRPRNISLMYIIKT
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23189,04000 Da
isoelectric point:4,90415
aromaticity:0,05804
hydropathy:-0,42991

Domains

Domains [InterPro]
SSF88874
STR
71–223
SSF88874
IPR037053
ATT
74–119
IPR037053
IPR011083
ATT
75–118
IPR011083
SSF88874
STR
75–223
SSF88874
AIX21592.1
1 224
Architecture
ATT
STR
ATT 74-119 | STR 120-223 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX21592.1
1 224
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,4534
Central domain 214 213 1 0,0035
C-terminal 214 224 10 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-213
C-terminal
214-224

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014f_Syn7803C8
[NCBI] 		2790336 Uroviricota > Caudoviricetes > Pantevenvirales > Atlauavirus > Atlauavirus tusconc8
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX21592.1 [NCBI]
Genbank nucleotide accession
KJ019058 [NCBI]
CDS location
range 211893 -> 212567
strand +
CDS
ATGTCTCAAATCAATTTCCCAAATATCCCATCAGATGGTGATGAGTTTTTGGCACCCAATGGTACAACTTACCAATATGATTCCGACACAGGTCAGTGGAAGATTCTATTAGGTCCTGGTGCCGATGGTCCCAAGGGTCCTATAGGTCCTGAAGGTGCTACTGGATCCACAGGTCCCGATGGTCCTACTGGTGCTACTGGAACGGATGCTACAAGAATAACTGGTGAGATTATTGCATTTGGTGGAACTACTGTTCCATCTGGTTGGCTTGAATGTAATGGTCAAGCTGCTCCTAGTGCTCTTGCTGCTGTATTAGGTATATCTAATGTACCAGACTTACGTGGTGAGTTTATAAGAGGATTTGATAACGGTAGAGGTGTTGATAGTGGCCGTGCCATTCTCACCGCTCAGGGTGATGAATTTGAGAGTCACACACACATTCAAAATTCCCATAACCATACACAAAATCCACACACTCACCAAGCAAATTACACACCCTTAACCTATGTGGCGGGGCAACCACAAGCAAATGGATTGGTTACCGCGGTAACAGCTCTAACAAACATTTCCACAAACACAGCAACTAATATTGCAAACACAGCAACCAACCAAAGCACAGGTGGCACTGAAACCCGTCCACGCAACATATCTCTGATGTACATCATTAAAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ffe3e58ef493619f0d6fd5286a6d9fb0c13a5e5e63e3e0a66357b698e895029d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank