Protein

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Genbank accession
UUW39927.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTYPATNSLEASELIIDVSNQLHEIVNEDALTEVITESGPIPSVRKAISDSFLFQEPLPWDQGNNEEAFNQLRTFVDETYWAPTASLANPVPMGVTPVGDSNWKIAPVGSNSSAIKGWDTEAQEDLLPQGSQLFKGDDGVYLKDGDTVPAGTTHLRVLVGGRPTIVSMSPIASGLVSLLTESDATIGVVQVTFINQAYLEFDSVSDAVDSVATGQFSTGTKVVVSDYYGASNPNGSGVLFFTIENPSGNVDGGKRILAGSYHLVQNLKRPYSCLAWGARSNAVSAADNDTPLQNWLNYRGALYAPQGKYNHTKPLVTHSGTILTGDGVVIDQAGITLPDGSVVSSSDLVTTFYKEGNDTTGGADASFILGDNANVKYITFSHFQLDSDNNCEFGFWRGLEGADIADNATNAYRLGNDVEVNNCGCEFPVNAVLAEYTVSPIVINKMRIIARSSGTTVVNNYNLDRAASVTFINSSISATTAAKANLNIANVKGVAGKPRFIKFIDTYVDTYNAVTDQSDRFPLWDFGFIKNPTDNNVSILYGPNERQKFAIETSAHVSVPTKRFALIRLSEDFAYEIIFNKPFGDVSGLTPLGRMASVRCVLNGGTVALQEFLKFHSAQDVKFFTKTGDDKSVYLQYEQQNDVGNKVTLTISGGMAEDIYNLQQIETPANFTEIIPSTPL
Physico‐chemical
properties
protein length:681 AA
molecular weight: 73528,01680 Da
isoelectric point:4,60859
aromaticity:0,09398
hydropathy:-0,15198

Domains

Domains [InterPro]
DC_0194
STR
1–681
DC_0194
IPR058969
ATT
10–106
IPR058969
UUW39927.1
1 681
Architecture
ATT
STR
ATT 1-106 | STR 107-681
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUW39927.1
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9915
Central domain 290 534 246 0,9535
C-terminal 535 681 146 0,9771
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-534
C-terminal
535-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMCC14
[NCBI] 		2968382 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUW39927.1 [NCBI]
Genbank nucleotide accession
ON922990 [NCBI]
CDS location
range 132427 -> 134472
strand -
CDS
ATGTCAACATATCCAGCAACAAATAGTTTAGAGGCTTCAGAGTTAATAATTGACGTCTCAAATCAACTTCACGAGATAGTTAATGAAGATGCACTAACAGAGGTTATAACAGAGAGTGGACCTATACCTTCAGTAAGAAAGGCGATATCTGATTCCTTTTTATTTCAAGAACCACTTCCTTGGGATCAAGGAAACAATGAAGAAGCATTTAATCAGTTACGAACTTTTGTAGATGAAACTTATTGGGCACCAACAGCTTCGCTGGCAAATCCTGTGCCAATGGGTGTTACCCCAGTTGGAGACAGTAATTGGAAGATTGCCCCTGTAGGGAGTAACAGTAGCGCCATAAAAGGGTGGGATACTGAAGCGCAAGAAGATTTGTTACCGCAAGGTTCACAGTTATTCAAAGGTGATGATGGCGTTTATTTGAAAGACGGCGATACAGTCCCAGCAGGAACTACACATCTTCGTGTTTTGGTTGGTGGTAGACCTACGATTGTTTCAATGTCACCAATTGCAAGCGGTTTAGTTAGTTTATTAACTGAATCTGATGCAACTATTGGTGTAGTTCAAGTAACGTTTATAAATCAAGCTTACTTAGAGTTTGATAGTGTATCTGATGCTGTTGATTCTGTCGCAACAGGACAATTTAGCACTGGAACTAAAGTTGTAGTAAGCGACTATTACGGAGCATCGAACCCAAACGGTTCAGGTGTTCTATTTTTCACTATTGAAAATCCATCAGGTAATGTGGACGGTGGTAAACGTATTTTGGCAGGATCTTATCATCTCGTTCAAAATCTAAAAAGACCTTATTCTTGTCTAGCGTGGGGCGCAAGAAGTAATGCAGTATCAGCAGCAGATAATGACACACCTTTGCAGAACTGGCTTAACTACAGGGGCGCGCTATATGCTCCGCAAGGTAAATACAATCACACTAAACCTTTGGTTACTCATTCTGGAACTATACTAACTGGCGATGGTGTAGTGATTGACCAAGCGGGAATTACCTTACCTGATGGTTCAGTTGTTTCAAGTTCTGACCTAGTTACCACTTTTTATAAGGAAGGTAACGACACCACAGGTGGTGCTGATGCCTCATTTATACTTGGTGATAATGCTAATGTGAAATACATTACATTTTCTCACTTTCAATTAGACTCGGATAACAATTGTGAGTTTGGGTTCTGGCGCGGCTTAGAAGGAGCAGACATAGCAGATAATGCAACCAATGCGTATCGTTTAGGTAATGATGTTGAGGTCAACAACTGTGGTTGTGAATTCCCTGTAAATGCTGTTTTAGCAGAGTACACTGTTTCGCCAATTGTAATTAATAAGATGAGAATTATAGCTAGGTCATCAGGAACTACAGTTGTGAATAACTACAACCTTGACAGAGCGGCGTCTGTTACTTTCATTAACAGCTCAATATCAGCTACAACAGCAGCAAAGGCAAACTTAAACATTGCAAATGTTAAGGGCGTTGCTGGTAAGCCTAGATTTATTAAATTCATTGATACGTATGTAGATACATACAATGCCGTAACAGATCAATCTGACAGGTTCCCTTTGTGGGATTTTGGTTTCATAAAGAACCCTACAGACAACAATGTGTCCATACTTTATGGCCCAAACGAAAGGCAAAAATTTGCCATAGAAACTTCAGCGCATGTTTCGGTTCCAACGAAGCGGTTTGCACTTATTAGGTTATCTGAAGATTTTGCTTATGAAATTATTTTCAATAAACCATTTGGTGACGTTTCAGGGCTAACTCCGCTAGGTCGAATGGCTAGTGTTAGATGTGTATTAAATGGTGGAACAGTCGCTCTTCAGGAGTTTTTAAAATTCCACTCAGCTCAAGATGTTAAGTTTTTCACCAAGACAGGTGATGATAAATCAGTATACCTACAATATGAGCAACAGAACGATGTTGGGAATAAAGTTACACTAACGATTTCCGGTGGAATGGCTGAAGATATATATAATTTACAGCAAATAGAAACCCCAGCCAACTTTACTGAAATTATACCTTCAACGCCACTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
43a53e46f3f648df959713729c7ff42112ac02a531a014d78e8e03246aa16b6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Nucleotide Sequence of Vibrio phage VPMCC14 Kar,P. and Ghosh,K. 2023-12-03 — GenBank