Protein

View in Explore
Genbank accession
YP_009133589.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,63
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIVDNRPGEVLYTNVAPIDENSNLDLTSPNNVLHKFNSVEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTVFAAKGINTESQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYYKPDSVETLAPKFSHHRLTCFEFADGFNSLQTLISGDPTRGLEQTVPNADYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPANDQIQARVEENRIVGPISDEYRVLQVTRNGNTATAVTVDEFDNPRDHGFSVGVNINISGVTGSSGPQSLVDASLYNGSFTVTSASGNIFTYQMLSEPSGNAVGSNVTVKTEIDTVDSASPYAFNLSLRSVWGMNGMLANGAKATGFKSMVVAQFTGLSLQKDDRAFVRFNESTGNYDNAAAGDGAHLDGFAEYRKGWAHRHIVCTNDSFIQAVSVFAVGYGTHFTAESGADMSITNSNSNFGSTALRSAGFKAKAFSKDKAGEITHIIPPKALSVISTTATGASGEVSITLANDGSVNGVIEGMNVTGTNVGVGATVVSVNTNTRIVTLSVVNTDTVNGNIIFGEETSVNWVNIDIQRTVTINQALAAGGGVAGSRLYLYGYTAQGSPPTTRVQGYSVGARQDGTGASAVADRLNVKLIPSVGSDAEIKTADISPYGPDVSGKAAGETGSPIQFDENTYTVGGLSVVGGWYLSVNATGNSIYTVLTTNTQTYGNVNFTPTTFIKRIPDSRDLADRTYRVRMVIDKDKSNPLPRDPLSGYVMQPLNSNTSAFKLNGTFYIYDIEKVQEFVRGVDDGIYYLTLLYASVAPSAANFNDRKFSQNVNEVYPSFDRDNPLADPDRAYSIADNETIGLVNATDNASPTPNKDPKRSITKEAIVNLLTDTGWADPSTEPAYNSVNKTLSSVQLTARFGDEETRKINIRENVADNSVAPIPIELRRHSIMRSGNHTFEYLGFGPGNYSTAFPQTQVETLSQDQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESVFAGPVTFQGQVSSTSNIIARKITYNNQDGTVIKSTLLAPEDSNGLPNFTNITNYDTPSDGDLVYNSTWSPGKSLGWIYYGQVWKEFGLTDIEQIDIQTFTDNNGDEQQHLGFGVAANTSYRANLKGNVRIDGNLVTTGTGGISADKYVSRIYRNGENNGPDGSILTFPITTFTGGVQHTATSLLVMLNGVVQIGGTTTEVNSGDANYSVDSNAQNIVFASGTPPQATDVLHIIEMPI
Physico‐chemical
properties
protein length:1348 AA
molecular weight: 145184,07550 Da
isoelectric point:4,81400
aromaticity:0,08976
hydropathy:-0,25319

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009133589.1
1 1348
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9698
Central domain 91 316 227 0,9560
C-terminal 317 1348 1031 0,0852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-316
C-terminal
317-1348

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014g
[NCBI] 		1493512 Uroviricota > Caudoviricetes > Pantevenvirales > Macariavirus > Macariavirus tuscon14g
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009133589.1 [NCBI]
Genbank nucleotide accession
NC_026924.1 [NCBI]
CDS location
range 23251 -> 27297
strand +
CDS
ATGGCTCTTACTAGACTTAAGAATATTATTACGTCCAGAACTGGACGTATTATCTACGTTAACCCTGATGATTTCGATGCATCCGATGCTATCGATAATAGGGGAAACTCGGCGTTACGACCCTTTAAGTCTATTCAAAGAGCGTTTCTTGAGGTAGCAAGATTCTCGTATCGAGTTGGTTTATCAAATGACGAATTTGATGCCTTCTCGATTATGCTGTATCCAGCAGAATATATTGTTGACAACAGACCTGGCGAAGTTTTATATACAAACGTTGCTCCCATTGATGAGAACTCAAACTTAGATTTGACTTCTCCAAACAATGTTCTGCATAAATTTAATTCGGTAGAAGGTGGTATCATTGTTCCTAGAGGTTGTTCCCTCGTTGGTACTGATCTTCGCCGTACAAAAATTATTCCTAAGTATGTTCCATATCCTACAGTATTTGCTGCAAAGGGTATTAATACAGAATCTCAAGTTCCTCCTCGTACTGCTATCTTTAAGGTAACTGGTGGTACTTATTTCTGGCAATTCTCATTCTTCGATGGTGCTGAAGAGGGTGTATATTACAAACCTGATAGTGTAGAGACACTAGCACCTAAATTTTCACACCATAGACTTACTTGTTTTGAATTTGCTGATGGATTTAATTCCTTGCAAACCTTAATCTCTGGTGATCCTACTAGAGGTTTAGAGCAAACAGTTCCTAATGCAGATTATTCTGCTGTTCCTAATATCTTAGAAAGAACTGACCTAGAAATTTACTATCAGAAAGTATCGAAAGCATTTGCTACTATTCCCGATACATCTGGTGACCCTGCTAATGACCAAATCCAGGCAAGAGTAGAAGAAAATAGAATCGTTGGTCCTATTTCCGATGAATACCGAGTCCTTCAAGTTACTCGTAATGGTAATACTGCTACGGCAGTTACTGTTGATGAGTTTGATAATCCCAGGGACCATGGTTTCTCTGTTGGTGTTAACATTAATATCTCAGGAGTTACTGGTTCATCTGGACCACAATCGTTAGTCGATGCAAGTTTGTATAATGGTTCCTTTACTGTAACTTCTGCATCAGGTAATATCTTTACCTATCAGATGCTATCCGAACCTTCTGGTAATGCTGTTGGTAGTAATGTTACAGTTAAGACTGAAATTGATACCGTTGACTCTGCATCACCATATGCGTTTAACTTGTCACTGAGAAGTGTCTGGGGCATGAATGGAATGTTGGCGAATGGTGCTAAAGCAACTGGTTTCAAATCAATGGTTGTTGCACAGTTCACTGGTTTGAGTCTTCAGAAAGATGATAGAGCGTTTGTAAGATTTAACGAGTCTACTGGTAATTATGATAATGCAGCAGCGGGTGATGGTGCTCACTTAGATGGTTTTGCTGAGTATCGTAAGGGTTGGGCACATAGACATATCGTCTGTACTAATGATTCTTTCATCCAGGCAGTTTCTGTGTTCGCTGTTGGATATGGCACACACTTTACTGCTGAAAGTGGTGCTGACATGTCGATTACGAACTCAAACTCTAACTTTGGATCGACAGCACTTCGTTCTGCTGGTTTCAAAGCAAAGGCATTCTCTAAAGATAAAGCAGGAGAAATTACACATATCATTCCTCCTAAAGCACTTAGTGTTATTTCTACAACTGCAACAGGTGCAAGTGGTGAGGTGAGTATTACGTTAGCAAACGATGGTTCTGTTAATGGTGTTATTGAGGGTATGAATGTTACTGGCACTAATGTTGGTGTCGGTGCAACAGTTGTTTCTGTTAATACTAACACCAGAATAGTTACGCTGTCTGTAGTTAACACCGATACTGTCAATGGCAATATTATTTTTGGAGAAGAGACTTCGGTTAACTGGGTGAATATTGACATTCAGAGAACAGTTACTATTAACCAAGCACTTGCTGCTGGTGGAGGAGTTGCTGGTTCAAGACTTTACCTCTATGGATATACTGCTCAAGGTTCACCACCAACAACTAGAGTACAAGGTTATAGTGTTGGTGCTCGTCAAGATGGTACTGGTGCTAGTGCAGTTGCAGATAGACTTAATGTTAAGTTGATTCCTTCTGTAGGTTCTGATGCTGAAATTAAAACCGCAGACATCTCTCCATATGGTCCTGATGTATCGGGTAAAGCAGCAGGAGAAACAGGATCTCCAATCCAATTTGATGAAAATACATACACTGTCGGTGGATTATCTGTTGTTGGTGGATGGTATCTATCTGTAAATGCAACTGGAAATTCAATTTATACAGTTCTCACTACAAATACACAAACATACGGCAATGTAAACTTTACACCAACAACATTTATTAAGAGAATTCCTGACTCTAGAGACCTTGCTGATAGAACTTACCGTGTTCGTATGGTTATTGACAAGGATAAGAGCAATCCTCTTCCTAGAGATCCTTTGAGTGGTTATGTAATGCAACCACTTAATAGTAATACATCCGCATTCAAATTGAATGGTACATTCTACATCTATGATATTGAAAAAGTACAAGAATTTGTTAGAGGCGTCGATGATGGAATATACTACCTCACCCTTTTATATGCATCTGTTGCACCTTCAGCTGCTAATTTTAACGACAGAAAGTTCAGTCAAAATGTCAACGAAGTCTACCCTTCGTTTGACAGAGACAACCCTCTTGCTGACCCTGATCGTGCTTATTCCATCGCTGACAACGAAACTATCGGTCTCGTAAATGCAACGGATAATGCAAGTCCAACTCCAAATAAAGATCCTAAGAGGTCTATTACGAAAGAGGCAATTGTTAATCTTTTAACCGACACTGGTTGGGCAGATCCTTCTACTGAACCTGCATATAATTCAGTTAACAAAACACTTTCTAGTGTTCAACTCACTGCTCGTTTTGGTGATGAAGAAACCAGAAAGATTAATATCAGAGAAAATGTTGCTGATAATTCGGTTGCACCGATTCCAATAGAACTTAGAAGGCATTCTATTATGCGTTCTGGTAATCACACGTTTGAGTATCTTGGTTTCGGTCCTGGTAACTACTCAACTGCATTCCCTCAGACACAAGTAGAAACTTTATCACAAGACCAAATTAAGTTCTCTCAGTCTATTAAAGAGGAAGCAGGAGTTGCATTCTATTCGGGTCTTAACTCTAATGGTGACCTATTCATTGGTAACCAGGTTATTAACCCTGTTACTGGTCAGATTACCAATGAAGATATTGCACAACTGAATGTTATTGGTGAAGAGAATACAACGATTGAGACATTCTCAGAGTTGGTTCTGACTGATAAACTCACTGTTATTGGTGGTGCATCTAACCAATTAGAATCTGTATTTGCTGGTCCTGTCACATTCCAAGGTCAGGTATCTTCCACTAGTAATATTATTGCTAGAAAGATTACTTATAATAACCAAGACGGTACGGTTATTAAATCTACTCTGTTAGCACCAGAAGATTCAAATGGTTTACCAAACTTTACTAATATCACTAACTATGACACACCTTCTGATGGTGATTTAGTTTATAATTCAACTTGGTCTCCTGGTAAATCTTTGGGGTGGATTTATTATGGTCAAGTTTGGAAAGAGTTTGGATTAACTGATATTGAGCAGATTGATATTCAAACATTTACTGACAATAATGGCGATGAGCAACAACACTTAGGTTTTGGTGTTGCTGCAAATACTTCATACCGTGCTAATCTAAAAGGTAATGTTAGAATTGATGGTAACTTAGTTACTACAGGTACGGGTGGTATTTCTGCTGACAAATATGTCAGTCGCATATATCGCAATGGTGAAAATAATGGACCTGACGGTAGTATTTTGACATTCCCAATTACTACTTTTACTGGCGGTGTTCAGCACACTGCAACTTCTCTCTTAGTTATGTTGAATGGCGTAGTTCAAATTGGAGGAACTACTACTGAAGTTAACAGTGGAGATGCTAACTATTCTGTTGATAGTAATGCACAAAACATTGTGTTTGCTTCGGGTACTCCTCCTCAGGCAACTGATGTTCTTCATATTATTGAAATGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f052d8fb577a564c79b59258bf69f3bc3a9bf952a717c49e90e17bc1f63a5b5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank