Protein

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Genbank accession
YP_010101901.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKITVGTPVTAPLTPGRDDTNVWPTHTAKYGAGGLEVVETTSDRDSISDARKTDKAVLVRSDDGGRAALYEWSSGGWNKVDIGDFSGMTITDGANVFNDILEIKLANITANQYPNDSVDSVTLTAEGSLDWATMGDPSSGSRATSVLVEPPLQTYPDPDNTGVTRLRVKEGSYEPMKAPGYLAYVDFPEKVIGKLGYHTLGHYDSAIWPTDTVVSGGGLIPTIADKKNIGLQEYDGKDPNKTGGTDFLVAFRVAFKGHAVNAGKIKAYLAKQPAPGTSDSADYLRDVNGELLVREVNYKAGDEYGHIEVLGIVNAKGLTNMSMHIEHNFSDSLLIEERAVGLSGVMVQALESKSKTGAALMQYEIDTKQNIEFNKIYYGDSIMDFNWEATHGLPMEEIQAGIGANLPDGFHFKNLSNIYISSKDDHIYVHDAGTVCDFSLGKIFNAFDTRSLHGKEINVKATIIDKDAPFTIGVVKWTGKPDQYTNNIFSSRNSATVVFDAGWELVGSLFFPSESVTGDHTLTKKFTVPSDANNFAVIIYPGVPNSPLTLKIKDFDVDVVNPFYGYEMYVAGKLNELHLEEDTEFVHFSQANENYVSLRYTIGKSADGDPMPVGVLRKGKADITLDPSINKIVGSAATSGEGGLKFGKDGKAIVNTTLWIHSEQPEKTASDVTFWYELVNSHGIATKIIPSETTFKVSGDSSGDYSMKEFSLDVITGDRIVLKASADKDDGAFIQSNSPAHPLVDIEIRIDELTAFANDDPFTGVELDQFDKVYTGVLTATKYVSHTDSATFHIEVPDDMNVSVLEAIKKLDDGTVTTVKSLDWSYNLKSQMLTVYFGEVVEECAITLGIYTA
Physico‐chemical
properties
protein length:854 AA
molecular weight: 92902,81050 Da
isoelectric point:4,76228
aromaticity:0,09251
hydropathy:-0,24859

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010101901.1
1 854
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,4338
Central domain 351 565 216 0,1971
C-terminal 566 854 288 0,8541
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-565
C-terminal
566-854

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Achelous
[NCBI] 		2576872 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus achelous
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010101901.1 [NCBI]
Genbank nucleotide accession
NC_055794.1 [NCBI]
CDS location
range 90456 -> 93020
strand +
CDS
ATGACAAAAATAACAGTTGGTACTCCAGTTACAGCACCTCTTACACCAGGTCGTGATGATACCAATGTTTGGCCAACGCACACAGCTAAATACGGTGCTGGTGGTTTAGAGGTAGTAGAGACTACCTCTGATAGAGATAGTATTTCAGATGCTAGAAAAACAGATAAAGCTGTACTAGTACGTTCAGACGATGGAGGGCGAGCAGCCCTCTATGAATGGTCTTCAGGTGGTTGGAATAAGGTAGATATAGGCGATTTCTCTGGTATGACAATCACAGATGGAGCTAATGTCTTCAATGACATATTAGAAATAAAACTAGCTAATATAACAGCTAATCAGTACCCTAACGACTCAGTTGACTCTGTGACACTGACAGCAGAGGGATCTCTAGATTGGGCTACTATGGGTGATCCTTCCTCTGGCAGTAGAGCAACATCAGTATTAGTAGAGCCACCTCTACAAACATACCCAGACCCAGATAATACCGGGGTTACTCGTCTTAGAGTGAAGGAAGGTTCCTATGAGCCAATGAAAGCTCCAGGATACTTAGCTTACGTTGACTTCCCAGAAAAAGTAATCGGTAAGTTGGGCTACCATACTCTAGGTCACTACGATAGTGCTATTTGGCCTACTGATACGGTAGTATCTGGTGGTGGGTTAATTCCTACTATTGCGGACAAAAAGAACATTGGTCTACAAGAGTATGACGGTAAAGACCCTAATAAGACAGGTGGTACAGACTTTTTAGTAGCTTTCCGAGTTGCTTTTAAAGGTCATGCTGTAAATGCAGGTAAAATTAAAGCATACCTAGCTAAACAACCTGCACCCGGTACATCCGACTCTGCTGATTACCTAAGAGATGTAAACGGTGAGTTACTAGTTCGAGAAGTGAACTATAAAGCCGGAGATGAGTATGGCCATATAGAGGTACTTGGTATTGTTAATGCCAAAGGTCTTACTAACATGTCTATGCACATTGAACATAACTTCAGTGATAGCTTACTTATTGAAGAGCGTGCTGTAGGGCTATCTGGTGTAATGGTACAAGCACTAGAATCTAAGTCTAAAACCGGTGCTGCATTAATGCAGTATGAAATAGATACTAAACAAAACATTGAGTTTAATAAGATCTATTACGGTGACAGTATTATGGATTTCAATTGGGAAGCTACTCATGGCCTACCAATGGAAGAAATCCAAGCCGGTATAGGGGCAAACCTGCCTGATGGTTTCCACTTTAAGAACCTGTCAAACATCTATATCAGTAGTAAAGATGACCACATCTATGTACACGATGCTGGTACAGTGTGTGACTTCAGTCTAGGTAAGATCTTTAATGCCTTCGATACTAGATCATTGCATGGTAAAGAAATCAACGTTAAAGCTACGATTATAGACAAAGATGCACCATTTACTATTGGTGTAGTTAAATGGACAGGAAAACCAGACCAATACACTAATAACATCTTCTCTAGCAGAAACAGTGCAACGGTTGTATTTGACGCTGGCTGGGAACTAGTAGGTTCGCTATTCTTCCCTTCAGAATCTGTAACAGGTGACCATACACTAACTAAGAAGTTTACAGTTCCTTCGGATGCTAATAACTTTGCAGTTATTATTTATCCTGGCGTGCCTAACTCTCCGCTTACACTGAAGATTAAGGACTTTGATGTTGATGTAGTTAATCCTTTCTATGGCTACGAAATGTATGTGGCTGGAAAACTTAACGAGCTACACCTAGAAGAAGACACTGAGTTTGTACACTTCAGTCAAGCTAACGAGAACTATGTATCTCTACGCTATACAATAGGTAAGTCAGCAGATGGTGACCCAATGCCTGTTGGTGTTTTGAGAAAAGGTAAAGCTGATATTACTCTAGACCCATCAATCAATAAAATTGTTGGCTCAGCTGCTACTAGTGGTGAGGGCGGTCTTAAATTCGGAAAAGATGGTAAAGCTATTGTTAATACCACTTTATGGATTCATTCAGAGCAACCTGAAAAGACTGCGTCAGACGTTACATTTTGGTATGAGTTAGTTAACTCTCACGGCATCGCTACTAAGATTATTCCATCAGAAACTACCTTTAAGGTTAGTGGTGACTCTTCAGGGGATTACTCAATGAAAGAGTTTTCACTTGATGTAATAACTGGCGATAGAATCGTTCTTAAAGCTTCTGCTGATAAGGATGATGGCGCATTTATTCAATCCAACTCACCAGCACACCCACTGGTTGATATTGAGATTAGAATTGATGAGTTAACCGCTTTTGCTAATGACGACCCATTTACAGGTGTAGAGCTAGATCAATTTGATAAAGTATACACCGGAGTACTTACAGCTACTAAATATGTATCACATACTGACTCAGCTACCTTCCATATTGAGGTACCAGATGATATGAATGTGTCAGTGCTAGAAGCTATTAAGAAACTAGATGATGGCACTGTAACAACAGTGAAAAGCCTAGACTGGTCTTACAACTTGAAATCACAAATGCTAACAGTGTATTTTGGTGAAGTTGTAGAGGAATGTGCTATTACTCTAGGTATTTATACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6caa369f8fd3d932138d8163de28fa51bdf25071a5e8c4bc2fd474da753d3713
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4690
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50