Protein

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Genbank accession
AFC22369.1 [GenBank]
Protein name
large distal tail fiber subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKAGDEMTGDLTLKNNTQLTVPRRINLVADTAGNAPYLLTTRSDNNAVTDPFPSQHTRTFTLFVNTKSNTSDPAGGANLAALLSHQSTTGAGSIELQAYDAPNKTTGATGILRARIGLNGWDGSINLSGASLNVGMSTTVSGNLTGTQLITKGNGNRNLFFQDSAGNELGLIYADTGKNVYVRSGGGAYASRFASDGTLLLANHLTVPGLSTFSGQAVFNGRMNVGTDYATQGANSSIIRVDTSGDGNAVGDGVTHFGYKDSNGLYNHYIRGTGALFINTKGGISINVQSYYNDVPQNIPAQYFLSTGTRGVKNYLRQFRGGNGDIIWHETVQGGLWRLATGSTDQEELQVSTDGYVRARAEVQSTSPGGGGQFRAVAGNYGFFIRNDGANTYFLLTNSGDPYGGWNGHRPFTIDNSNGQVTVGSQGLFVPGSARFNSGLGCGTLNGLGTNAICLGDDDTGFRQEGDGYLDAYSNSQRIMRWTANDGGSAQSYKRFYVQNTDGPALVLNGTAINSSCYMLIQKAGNKGMYIGFGGADEEVTMHNYRLNTAIVLRAGDTYMNRGLYIEGNANFNDVYIRSDIRLKSNLVELKDSLRKVEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDRDTGMLTISPSAINALLVNAINEIRERLEVIENKLGA
Physico‐chemical
properties
protein length:736 AA
molecular weight: 78739,25910 Da
isoelectric point:6,05519
aromaticity:0,08424
hydropathy:-0,38003

Domains

Domains [InterPro]
DC_0466
STR
1–58
DC_0466 DC_0932
IPR048390
ATT
412–474
IPR048390 G3DSA:6.20.80.10 IPR030392
IPR030392
CHP
639–697
IPR030392 Coil
AFC22369.1
1 736
Architecture
STR
STR
ATT
STR
STR 1-58 | STR 135-411 | ATT 412-474 | STR 475-734 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFC22369.1
1 736
Domain Start End Length (AA) Confidence
N-terminal 1 464 464 0,1301
Central domain 465 663 200 0,1735
C-terminal 664 736 72 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-464
Central
465-663
C-terminal
664-736

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP161
[NCBI] 		1141138 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus gap161
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
4595a398515686b5c17a656f229e85af74e4dadd4b088ee01cde03ffef9c4cf2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6131
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50