Protein

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Genbank accession
WPH61104.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MTTRPTLGRIWATNGVRVDPGSLKYSNGWIGEIPTYEVLNFMQYRIDAALQAFAERGVPEWGSDVIYVKGAKAWGNDGKIYVATVDSPSRTKQPFTNPSQWELSSDQFTMAQHQAMIDKFDAHITRRDDPHDVTAEQAGTYTSVAIDGKIDPLKLSLNSHIADKNNPHGETAESIGAVPKSGGAYTGPVSFAGYPVKINPGAGSHEIFGDDANFGIRTATATLAIEKATNRAFIMVGGVKNYLLSETEYTNYRRTIEPQYAVGTPDLEIDMMSDTHLRQGFGFSNFLRPTAGIYTDKGGVARTAQVDEPRHTVKGLMIDSSLSERLDVDAENNASGFPSITYNVRGMMEARYAVDTHLLTAVSSREDILYIRADGRVGFKLKNSSGVSAEMVSILQVPLGVEFSITVVVTPTGCEMYLDGVLQATLTGSYNADTYSVLRVGSATNRTCAWYARSLKVWAKELTATQVTTL
Physico‐chemical
properties
protein length:470 AA
molecular weight: 51249,96830 Da
isoelectric point:5,66863
aromaticity:0,08936
hydropathy:-0,26553

Domains

Domains [InterPro]
DC_0782
STR
6–469
DC_0782
G3DSA:2.60.120.200
STR
320–470
G3DSA:2.60.120.200
IPR013320
STR
365–470
IPR013320
WPH61104.1
1 470
Architecture
STR
STR 6-470
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPH61104.1
1 470
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,8104
Central domain 227 425 200 0,4217
C-terminal 426 470 44 0,9113
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-425
C-terminal
426-470

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AhydM-H1
[NCBI] 		3096622 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH61104.1 [NCBI]
Genbank nucleotide accession
OR795024.1 [NCBI]
CDS location
range 33453 -> 34865
strand +
CDS
ATGACCACAAGACCAACACTGGGTCGAATCTGGGCCACGAACGGCGTAAGGGTAGACCCAGGGAGCCTCAAGTATTCGAACGGCTGGATCGGTGAAATCCCGACTTATGAAGTGCTGAACTTCATGCAGTACAGGATTGACGCCGCGCTTCAAGCCTTTGCAGAAAGGGGTGTGCCGGAGTGGGGCTCGGACGTAATATACGTCAAGGGTGCCAAGGCTTGGGGCAATGACGGTAAGATCTATGTTGCTACGGTGGATTCACCGTCTCGTACGAAGCAACCGTTTACCAATCCAAGCCAATGGGAACTGTCATCAGACCAATTCACGATGGCACAGCACCAGGCAATGATCGACAAGTTCGATGCGCACATAACCAGGCGAGACGACCCGCATGACGTGACAGCTGAGCAAGCTGGAACCTACACATCAGTAGCGATAGACGGGAAAATCGATCCCCTCAAGCTCAGCCTGAACAGCCACATCGCCGACAAGAACAACCCTCATGGGGAAACAGCTGAGTCGATTGGCGCGGTACCGAAATCAGGCGGTGCGTATACAGGCCCAGTATCATTCGCTGGATACCCTGTAAAGATCAACCCCGGTGCAGGAAGCCACGAGATATTCGGAGACGATGCAAACTTCGGAATTCGAACTGCCACAGCAACACTGGCAATAGAGAAGGCGACGAACAGAGCGTTCATCATGGTGGGTGGCGTAAAGAACTACCTGCTGAGTGAGACAGAGTACACCAACTATCGCAGAACTATTGAGCCACAATATGCGGTAGGTACCCCGGACCTCGAAATAGATATGATGAGCGATACACATCTACGGCAGGGGTTTGGGTTCTCGAACTTCCTGAGACCGACTGCAGGCATCTACACCGACAAAGGCGGTGTGGCGAGAACTGCGCAGGTGGATGAGCCAAGACACACTGTAAAAGGGCTAATGATAGACTCCTCCCTGAGTGAAAGACTGGATGTAGACGCAGAAAACAACGCATCAGGATTCCCAAGCATCACCTACAACGTGCGTGGGATGATGGAAGCCAGATACGCGGTCGACACTCACCTGCTGACGGCTGTATCCAGTAGGGAAGATATCTTGTACATCCGAGCAGATGGCAGGGTTGGATTCAAACTCAAAAACTCCAGTGGCGTGTCGGCAGAAATGGTGTCTATACTGCAGGTGCCATTGGGCGTCGAATTCAGCATCACAGTGGTGGTAACACCAACAGGATGTGAAATGTACCTGGATGGGGTATTGCAAGCCACACTGACAGGATCCTATAACGCAGACACGTACAGCGTGCTACGAGTGGGGTCGGCAACCAACAGAACATGTGCTTGGTATGCGAGGTCGCTCAAAGTATGGGCCAAAGAACTAACCGCAACTCAAGTGACAACACTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abcb55bb89b74ce7c270af2107597e1f2bb3366808a00b4fd9d382aa60a0c2e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7832
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Aeromonas phages Nagar,V., Pansare Godambe,L., Newase,S., Tyagi,A. and Shashidhar,R. 2022-10 — GenBank