Protein

View in Explore
Genbank accession
WGL39652.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSQVITNAFEQYWQSCLAAEKPVVLDEFILADIPNLDITSPIDPDTGLPPESQIVHRQNVDQRGRINNNAVAYTIVMDTTVGDFSFNAMYLRNKANGVIGMIVYKGRETKLKTNQTTGQVGNSLVKSMLMGYDQAAEATLTNVDAGTWQIDYAARLRGMDEDLRQLASQLYGHHTFIGDGFKVVEQDGAYQVSQGVAIVGGLRIELKVPEVIHPGTKPIGIWVDVHRAGSLLSEHQNHFTIITSVADLADHVDSNGYQHYVAKLAIIGNDGNVEDSRGFSDSIKQQCSSISKLRGIEPSRQGQHIEVESYYDNWAVIVDGAPKFGGKFWFDKNDTSSEDDGFKVIVTKKGARWKRVKGEYSIGHAGAIEDINVDSTNNVQAAIKGTKPGAELGFYGGPYRFEEVVAEKPIVLVGDADLLFKKIRIKTSDFTSRLSGKIKAVRYEEQARAFQCAAYEEGVNYKNIKILFPNFEGFFYSTDFRGRAYAASKNDPTNRVLKNTLIMGGTSEAPYGLNAGHFQHTGVTNAKCIGCSTYGGINATSYNFINGNGYIIVQGCYDHGNLYGSLEIENNNVSYAIVSGNAFGSQLWIDDTSNVSVTANVVSDRILITAQTDDTNNIVLSGNSCARISITKFGKDPTGRHKSVHVVGNTTYGGTGQHDLFADDSVDGLTVEVNKFNGENVSSVAVVRSANCDLLIRNNKGKRPLVISGEGGRVVEYGNDGMKTSGDSDSRHLSNLMIPNKSFLDLPGQYLYGTKYTGTVAPTGNKELALDIPDSGDLAFRSVSFWVMIRDSENNNISSFRQDALYKVVGNSVGLSFGQAYSAMGIDTNSISLENSGSSVMQIRVAVKNNSEGKKLQVTVLPCVSSKFGLED
Physico‐chemical
properties
protein length:872 AA
molecular weight: 94938,11920 Da
isoelectric point:5,76946
aromaticity:0,08716
hydropathy:-0,29255

Domains

Domains [InterPro]
DC_1466
ATT
1–195
DC_1466 DC_0717 DC_0828
IPR022225
ATT
3–159
IPR022225 IPR011050
IPR011050
STR
369–675
IPR011050
WGL39652.1
1 872
Architecture
ATT
ATT
STR
RBD
ATT 1-195 | ATT 253-395 | STR 396-681 | RBD 682-872
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGL39652.1
1 872
Domain Start End Length (AA) Confidence
N-terminal 1 376 376 0,9953
Central domain 377 722 347 0,9869
C-terminal 723 872 149 0,9218
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-376
Central
377-722
C-terminal
723-872

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage P05B
[NCBI] 		3028151 Viruses >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL39652.1 [NCBI]
Genbank nucleotide accession
OQ680521.1 [NCBI]
CDS location
range 7580 -> 10198
strand +
CDS
ATGAGCCAGGTCATTACCAACGCATTCGAACAATATTGGCAGTCCTGCTTGGCCGCAGAGAAACCGGTCGTGCTGGATGAGTTTATCTTGGCTGATATCCCCAATCTGGATATCACCTCCCCCATCGACCCTGATACCGGCCTGCCGCCGGAAAGCCAGATCGTCCATCGCCAGAATGTGGACCAGCGCGGCCGCATCAACAACAACGCGGTGGCCTACACCATCGTGATGGATACCACTGTCGGTGACTTCTCGTTCAACGCCATGTACCTGCGCAACAAAGCCAACGGCGTGATCGGGATGATTGTCTACAAGGGGCGCGAGACCAAGCTCAAGACCAACCAGACCACAGGACAGGTAGGGAACTCCCTGGTCAAGTCGATGCTGATGGGTTACGACCAGGCGGCAGAGGCCACCCTCACCAATGTGGATGCAGGAACGTGGCAAATTGACTATGCCGCTCGCCTGCGCGGGATGGATGAAGACCTGCGCCAGCTGGCCAGCCAGCTATATGGTCATCACACATTTATCGGTGATGGGTTCAAGGTGGTCGAGCAGGACGGCGCCTATCAGGTCAGCCAGGGCGTGGCCATCGTCGGCGGCCTGCGGATAGAACTGAAAGTGCCAGAGGTCATCCACCCGGGCACCAAGCCGATCGGCATCTGGGTTGATGTACATCGCGCTGGTTCGCTGCTCTCCGAACACCAGAACCACTTCACTATCATCACCAGCGTGGCGGATCTGGCCGACCATGTGGACAGCAACGGCTATCAGCACTATGTGGCAAAGCTGGCGATAATTGGTAACGATGGCAACGTAGAAGACTCGCGAGGATTTAGCGATTCCATCAAACAGCAATGCAGCAGCATCAGCAAATTGAGGGGGATCGAGCCAAGCAGGCAAGGCCAACATATTGAAGTGGAAAGCTACTACGATAACTGGGCTGTTATCGTGGATGGTGCCCCTAAATTTGGCGGTAAATTCTGGTTCGATAAGAATGACACCTCCTCGGAAGACGATGGATTCAAAGTCATCGTGACCAAGAAAGGGGCGCGCTGGAAGCGTGTGAAAGGTGAATATTCCATCGGGCATGCTGGCGCGATTGAGGACATCAACGTTGACAGCACCAACAATGTTCAAGCTGCGATAAAAGGAACCAAGCCTGGGGCCGAACTCGGATTTTATGGTGGACCATATCGTTTTGAAGAGGTAGTGGCGGAAAAACCGATCGTGCTGGTTGGTGACGCCGATCTTCTCTTTAAAAAGATACGGATTAAAACCTCAGACTTTACCAGCAGGCTATCAGGAAAAATTAAAGCAGTAAGATATGAGGAACAAGCAAGAGCGTTTCAATGTGCTGCATATGAGGAAGGAGTTAACTACAAGAACATTAAAATATTATTCCCTAACTTTGAAGGGTTCTTCTACAGTACAGACTTTAGAGGGAGGGCATATGCAGCCAGCAAGAATGACCCGACAAATAGAGTGCTAAAAAACACATTGATTATGGGAGGCACATCTGAAGCACCATATGGGCTTAATGCTGGTCACTTTCAACATACTGGCGTGACAAACGCGAAGTGTATTGGCTGTTCAACTTATGGTGGTATTAATGCCACTTCATATAACTTTATCAATGGCAATGGTTACATCATCGTTCAGGGATGTTATGACCATGGAAACCTATACGGCTCACTAGAGATTGAGAATAATAATGTATCTTATGCGATCGTCTCTGGTAATGCGTTTGGTAGTCAGCTTTGGATTGATGATACATCAAACGTTTCTGTAACAGCTAACGTAGTATCAGATCGCATTCTTATTACCGCACAAACGGATGATACCAATAACATCGTATTGTCAGGGAACTCATGCGCTAGGATATCCATTACCAAGTTTGGCAAAGACCCAACTGGACGACACAAGAGTGTGCATGTGGTTGGTAATACAACCTATGGTGGCACAGGTCAGCATGACCTATTTGCGGACGATTCTGTCGATGGCCTCACAGTCGAAGTGAACAAGTTCAATGGTGAGAATGTCAGTTCAGTGGCGGTAGTTCGTAGCGCCAATTGCGATCTGCTAATACGAAACAACAAGGGTAAGCGACCACTAGTAATATCGGGGGAAGGTGGCCGTGTTGTTGAGTATGGCAATGATGGAATGAAGACATCAGGTGACTCAGACAGCAGACATCTGTCTAACCTGATGATACCTAATAAAAGCTTTCTTGACTTGCCAGGGCAATACCTATACGGAACAAAGTACACAGGAACTGTGGCTCCTACGGGCAATAAAGAATTGGCACTAGACATTCCGGATAGCGGTGATCTGGCATTCAGATCTGTATCATTTTGGGTCATGATCCGAGACTCTGAAAACAATAACATATCAAGTTTCAGGCAAGATGCTCTGTACAAGGTTGTTGGTAACTCGGTTGGCCTTAGCTTTGGTCAGGCTTATTCAGCTATGGGTATAGATACGAATAGTATTTCACTGGAAAACTCTGGGTCATCAGTGATGCAGATTCGCGTTGCGGTTAAAAACAACTCAGAAGGTAAAAAGCTCCAAGTGACAGTTTTACCTTGTGTTTCGAGCAAGTTTGGACTTGAGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
56e619d03bbda928de4c44c65f2e757fb969105d292ace15bfd6285cddd5d69c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8262
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent bacteriophage P05B from an Aeromonas hydrophila isolate: Characterization and complete genome sequence Lyu,S., Liu,L., Guo,Q., Shen,W., Han,M., Xiong,F., Dai,X., Qi,T. and Lou,B. 2024-01 — GenBank