Protein

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Genbank accession
YP_010356837.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGLINNEELYPKDKKITINDQVIGSDKDNNGVTRNYPMSGIVSVINDANELKFSLYKYSDDDANLRKGVFNITGSDFKFSDTDQESNNNTALFNVIKNNKENIILYLKDGTENFGYYHVKNATQNTQSFTFELELIHNIKAGSYVLENTYVFNIGITTSTLTQIQSDWNESNAVEPSFIKNKPLIPTKYTDEEVRDVVGATLVAGSNVTITPDDAADTITIDATSSGTTDLSYVPSTRTIESSSGKNTVIPTVTSANAGLMKANFYEEGTFNPVLNAVGVTDYKVTQATGGYTRVGNLVHYYITIYTSGNTIGTPTSELKISGLPFNSLSTQSLEGGVVRFFVGSNLSLTDVSNLTIGIGFNSTDLYFHLKHITPTSPSPITFSGGGIIRVSGTYTTNFYTP
Physico‐chemical
properties
protein length:402 AA
molecular weight: 43822,05980 Da
isoelectric point:4,84788
aromaticity:0,09950
hydropathy:-0,27264

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Tenacibaculum phage Gundel_1
[NCBI] 		2745672 Uroviricota > Caudoviricetes > Pachyviridae > Gundelvirus Gundel >
Host Tenacibaculum sp. AHE14PA
[NCBI] 		2745565 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Tenacibaculum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010356837.1 [NCBI]
Genbank nucleotide accession
NC_062747.1 [NCBI]
CDS location
range 54889 -> 56097
strand +
CDS
ATGGGGTTAATAAATAACGAAGAACTTTACCCAAAAGACAAAAAAATAACTATCAACGATCAAGTTATTGGTTCTGATAAAGATAATAATGGAGTTACAAGAAATTACCCCATGTCTGGTATTGTTAGCGTAATAAACGATGCTAACGAATTAAAATTTAGCCTATATAAGTACTCTGATGATGATGCTAATCTAAGAAAAGGAGTATTCAATATTACCGGTTCAGATTTTAAGTTTAGCGATACAGATCAGGAAAGTAATAATAATACTGCTTTATTTAATGTTATAAAAAACAATAAAGAAAATATTATCTTATACCTTAAAGATGGTACTGAGAATTTCGGGTATTATCATGTTAAAAATGCGACTCAAAACACTCAAAGTTTTACTTTCGAGTTAGAGCTAATACATAATATTAAAGCAGGTTCTTACGTGTTAGAAAACACTTATGTTTTTAACATAGGAATAACAACATCTACATTAACTCAAATACAATCTGACTGGAATGAATCAAACGCTGTAGAGCCAAGTTTTATTAAAAACAAGCCCCTAATACCTACAAAATACACAGACGAAGAAGTTCGTGATGTAGTAGGAGCTACGCTAGTAGCAGGTTCAAACGTAACAATAACACCAGATGATGCAGCAGACACTATTACAATAGATGCTACTAGTTCAGGAACAACAGATTTAAGCTATGTGCCAAGTACAAGAACAATAGAATCTAGTAGTGGTAAAAACACTGTGATACCAACAGTAACTTCTGCTAACGCAGGGTTAATGAAGGCTAATTTTTACGAAGAAGGTACATTCAATCCTGTTTTAAATGCAGTTGGTGTTACTGATTATAAAGTGACCCAAGCAACAGGAGGTTATACAAGAGTTGGAAATTTAGTACATTATTACATAACAATATATACATCAGGTAATACTATTGGAACACCTACATCGGAATTAAAAATATCAGGTTTACCTTTTAATAGTTTAAGTACTCAATCTTTAGAGGGGGGTGTTGTGAGGTTTTTTGTAGGTTCAAATTTATCCCTTACTGATGTATCAAATTTAACAATAGGAATTGGGTTTAATTCTACAGATTTATATTTCCATTTAAAACACATAACACCTACTTCTCCCTCACCAATTACTTTTTCAGGTGGAGGAATTATAAGAGTATCAGGTACATACACAACAAATTTTTACACCCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b6c53fa40e3372f1bb234dc04c35017d7056ccf1019f96a09a10c26018ef201
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank