Protein

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Genbank accession
XPN41337.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTTITNLPETSKVNGSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDTDGADLIQSSNGNTVQEELNNNLLNDREQWRRSLAEAGLTLVNGSFEEGATVNNKTDAVWHIAGGQCYTWDGEFPKTVPAGSTPGTSGGIGTGAWLSVGDATLRTELLSVNGAVIQSFNSVSDMKSYNITAGRTYHTKGYWAEGDGGGALYYVTTPSGDEPNGYSDHKSENGLYIRLLSEPTDLNHGVKISDIYDPETARWNRNAIQTMLRDTRWSYTECKAQGVIYLLGSVNVGRDNITFKINKGCSLKGRYSDPSISTPDQGGHMIGFAKFFDPDNGDFIPWRDGDTRINPYIENVHVILEGDVSTEFNDSHINKYNNNCIGFLKAKNCSIRGTGGSSSSDHRAFNFDGIDTNAPNGSENRGGSINCHIDVGYSYNCVDNPCMIAADQFTASSCSIKIGDVRKMVAGGYNSPIVINVSGISHFDINIGRFLVDGGVTPALVVARGARSVNVTGGVIQGCTMGVYSVDTLDISLNIKEMFNVPIGVAVANNSTIGPRSIIIRGINAVNSSFSAAYAHQASALPAAYVEIADNNFSAASSSFKFIGGKTSGNTPKRQNIHDNVTSSTGDGGQDLNYLPGTQKNIIGGSSTTSLSVNFKDGNWNFTKATVVAGQGGGRGIATIDLLAKGVSSNSMVIRAGAYDVTVAMPANGNTLTVSVVSPNFIDYVTLHN
Physico‐chemical
properties
protein length:721 AA
molecular weight: 76687,09190 Da
isoelectric point:5,36113
aromaticity:0,07906
hydropathy:-0,26033

Domains

Domains [InterPro]
DC_0369
STR
1–719
DC_0369
G3DSA:2.10.10.80
ATT
89–159
G3DSA:2.10.10.80
IPR040775
RBD
92–150
IPR040775
XPN41337.1
1 721
Architecture
STR
ATT
STR
STR 1-88 | ATT 89-159 | STR 160-719 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN41337.1
1 721
Domain Start End Length (AA) Confidence
N-terminal 1 249 249 0,9911
Central domain 250 621 373 0,9856
C-terminal 622 721 99 0,9675
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-249
Central
250-621
C-terminal
622-721

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC.P2
[NCBI] 		3384876 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN41337.1 [NCBI]
Genbank nucleotide accession
PQ631072.1 [NCBI]
CDS location
range 91814 -> 93979
strand +
CDS
ATGTCAACTACAATTACTAATTTACCCGAAACATCAAAAGTTAATGGTTCAGATTACCTGGTTTTAGATCAACCTGATAAAACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATACAGATGGAGCAGATTTAATACAATCCTCAAATGGTAATACTGTTCAGGAAGAGTTGAATAACAATCTTCTTAATGATCGTGAACAGTGGCGTCGTAGTCTTGCTGAGGCAGGGTTAACCCTTGTCAACGGTAGCTTTGAAGAAGGGGCTACAGTAAACAATAAGACGGATGCTGTTTGGCATATTGCTGGTGGGCAGTGCTATACGTGGGATGGCGAGTTCCCTAAAACTGTTCCTGCCGGATCAACCCCAGGAACATCTGGTGGTATTGGTACTGGAGCGTGGTTGAGTGTTGGTGATGCAACATTAAGAACAGAATTGTTATCTGTTAATGGTGCTGTAATTCAATCTTTTAACAGTGTTTCAGACATGAAATCTTACAATATAACAGCAGGAAGAACATATCATACAAAAGGATATTGGGCAGAAGGTGATGGTGGTGGTGCTCTATATTATGTCACAACTCCGTCAGGAGACGAACCAAATGGTTATAGCGATCACAAGTCTGAAAATGGTTTATACATTCGTTTGTTGTCAGAACCTACTGATTTGAATCATGGGGTTAAGATTAGCGATATTTATGACCCTGAAACGGCAAGGTGGAATCGAAACGCGATCCAAACTATGTTGCGTGATACCCGCTGGAGCTATACCGAATGTAAAGCACAAGGCGTAATTTATCTTTTGGGTAGTGTAAATGTAGGTAGAGATAATATCACATTCAAAATCAACAAAGGGTGCTCGCTTAAAGGTAGGTATTCAGATCCTAGTATTTCAACCCCAGATCAAGGTGGACACATGATAGGATTCGCTAAATTTTTCGACCCGGATAATGGTGATTTTATACCATGGAGAGATGGTGATACACGTATTAACCCTTATATAGAAAATGTACATGTTATTTTAGAAGGTGACGTATCTACTGAATTTAACGACAGCCATATAAACAAATATAACAATAACTGTATAGGGTTCCTGAAGGCTAAAAATTGCAGTATTCGTGGTACAGGTGGTTCATCATCCAGCGACCATCGAGCTTTTAACTTTGACGGCATAGACACTAATGCCCCCAATGGCTCTGAAAACAGAGGTGGTAGCATTAATTGTCATATTGATGTTGGTTATTCTTACAATTGTGTAGACAACCCTTGCATGATTGCTGCTGACCAATTCACCGCAAGTAGTTGCAGCATTAAAATCGGCGATGTGCGTAAAATGGTAGCAGGTGGTTATAACAGTCCGATTGTTATAAATGTATCCGGCATCTCGCATTTCGATATTAATATAGGTAGATTTTTGGTTGATGGTGGTGTCACACCAGCGTTAGTTGTAGCTCGTGGCGCTCGTTCAGTTAACGTAACAGGTGGTGTTATACAGGGCTGTACAATGGGTGTGTATTCTGTAGATACCCTGGATATTTCTTTAAACATTAAGGAAATGTTTAATGTACCAATAGGTGTTGCTGTTGCAAATAACAGCACTATCGGCCCGAGAAGTATTATTATTCGTGGAATTAACGCAGTTAACTCCAGCTTTTCCGCTGCTTATGCGCATCAAGCATCTGCATTACCAGCAGCATATGTCGAAATAGCTGATAATAACTTCAGTGCCGCTTCTAGTTCATTTAAGTTTATTGGTGGTAAAACTTCAGGAAACACTCCTAAAAGACAAAACATTCATGACAATGTTACATCTTCTACGGGAGATGGTGGTCAAGATCTCAACTATTTGCCAGGCACTCAGAAAAACATTATAGGAGGTAGTTCAACTACTAGTCTCAGTGTCAACTTTAAAGATGGCAACTGGAATTTCACAAAAGCGACCGTAGTTGCTGGGCAAGGTGGTGGGCGTGGTATTGCCACCATTGATCTACTTGCTAAAGGCGTTTCCAGCAACAGCATGGTTATAAGGGCTGGTGCTTATGATGTCACTGTAGCTATGCCTGCCAATGGAAATACGCTGACAGTTAGCGTAGTGTCGCCAAACTTCATTGATTATGTGACGCTTCATAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
90fac0cee1c75cc385b1682b9db654b28d995a1adb567cdf1fc761fabff8838d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7260
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50