Protein

View in Explore
Genbank accession
YP_009910762.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MFFTQEDYRKIEKWLLANSRKDTDFAGAATPLKGNETVVLVQNGKNVKASVKDVVEQLFLLGVSDFVNITDKYGESYISLSQAIELIPYRSRKIGQVVTFLDDTGKWAMFQFQGTRKNQWGTLSLWVDLIDLMTGLTITDSEDIVTETNSANQVALKFADKTYNEADYSGLGRVYLRKNIVNVEDPVTGNIVKMNYLTQSMISKENTIYIVQYSYNLNGQTITIPSGCVLKFEGGSISNGSIKGTDTNIIAPQIRIFNTILLSGTWKVRDIFDDWFDFNATTNFDNINNFYNISILQSDDLENNVILKGNYYSSLKDGIVLSLSSNTNLVLNGSISLLPNNLSSYSIIKGVDKENIKISGGGRLIGDLQNHLGDTGEWGFGISFTGCKTVSITNIDSSYMWGDGLYIGASDDTKEETLSQNIQVNNCKFEYNRRQGISITGAVDVFVNNCYFFNTGKINGTSPKAGLDIEPSGLYNSNVTISNCIADSNVSTGFLVYGDNRNIVIDNCASKNQLISITIAQRSATTDNDDVFIRHGNIGGSLQITRGNIRVEDCEVDSVYFTADTSGIGANVTISNSVIGAKRWEGSTYFNSVFLIDSNSQINNLYIFDSKIDYDPSILTQGLFNIGGNSIRDNILFENCDISQKNTVNSLNTKVGSYRNCRFYNMTRIYLANEPNKTVEFTDNYCAMTRESSSTNIFSFLNSSSTQDVILFVVRNNTFSTKGSINVGSIGLIDVTGVNLGNKMIFENNHFLTQYPLTQEQIIKALSNRITVDTNYNFTSRFPYRATLESLPAYNTFDAGALIYGDDNLLYFWNGTNLTNSEGTDARKVVIV
Physico‐chemical
properties
protein length:832 AA
molecular weight: 92331,17820 Da
isoelectric point:4,85123
aromaticity:0,10457
hydropathy:-0,20072

Domains

Domains [InterPro]
DC_0729
ATT
16–55
DC_0729 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1108
IPR012334
STR
305–538
IPR012334
IPR011050
STR
306–519
IPR011050
IPR012334
STR
320–538
IPR012334
IPR039448
ENZ
424–578
IPR039448
YP_009910762.1
1 832
Architecture
ATT
STR
ENZ
RBD
ATT 16-55 | STR 305-538 | ENZ 539-577 | RBD 578-832
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009910762.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 285 285 0,9366
Central domain 286 781 497 0,9818
C-terminal 782 832 50 0,9697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-285
Central
286-781
C-terminal
782-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage crAss001
[NCBI] 		2301731 Uroviricota > Caudoviricetes > Crassvirales > Asinivirinae > Kehishuvirus
Host Bacteroides intestinalis
[NCBI] 		329854 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009910762.1 [NCBI]
Genbank nucleotide accession
NC_049977.1 [NCBI]
CDS location
range 14369 -> 16867
strand +
CDS
ATGTTTTTTACACAAGAAGATTATAGAAAAATAGAGAAGTGGCTCCTTGCAAACAGTAGAAAGGATACTGATTTTGCTGGAGCTGCAACTCCTCTTAAAGGAAATGAAACTGTAGTTCTTGTACAGAATGGTAAGAATGTAAAGGCATCAGTGAAAGATGTAGTTGAGCAACTATTTCTTCTTGGTGTATCTGACTTTGTGAACATTACTGATAAGTATGGTGAGAGTTATATTTCACTATCTCAAGCTATAGAATTAATTCCTTATAGGAGTAGAAAGATTGGTCAGGTAGTTACTTTCTTGGATGATACTGGAAAATGGGCTATGTTCCAATTCCAAGGTACAAGGAAGAATCAGTGGGGTACTTTATCTCTTTGGGTTGATTTGATAGACCTTATGACAGGTCTTACTATCACAGATAGTGAAGATATTGTTACTGAGACTAATAGTGCAAATCAAGTAGCTCTTAAGTTTGCAGATAAAACTTATAATGAAGCTGACTACTCAGGTTTAGGCAGAGTATATCTTAGAAAGAATATTGTAAATGTTGAAGACCCTGTAACAGGTAATATAGTTAAGATGAATTACCTTACACAGTCAATGATTTCTAAAGAGAATACTATCTATATAGTGCAATATAGCTATAACTTGAATGGTCAAACTATCACTATCCCAAGTGGGTGTGTACTCAAGTTTGAAGGAGGGAGTATAAGTAATGGTTCTATAAAGGGCACAGATACTAATATAATAGCTCCTCAAATTAGAATATTTAATACTATCTTATTATCTGGTACTTGGAAAGTTAGAGATATATTTGATGATTGGTTTGACTTTAATGCTACTACCAATTTTGATAATATCAATAATTTCTATAATATATCCATATTACAATCAGATGATTTGGAGAATAATGTAATTCTTAAAGGGAACTATTATAGTTCTCTTAAAGATGGAATAGTTTTGTCCTTATCTTCTAATACCAATTTAGTACTTAATGGTAGTATTAGCTTGCTTCCTAATAACCTATCTTCATATTCTATAATAAAAGGAGTTGATAAGGAAAATATTAAAATAAGTGGAGGGGGAAGATTAATTGGAGATTTGCAAAATCACTTAGGTGATACTGGAGAATGGGGATTTGGTATTAGTTTCACAGGTTGTAAAACTGTATCAATAACTAATATTGATAGTTCTTATATGTGGGGAGATGGCTTATATATTGGGGCATCAGATGATACAAAAGAGGAGACACTATCTCAAAACATACAAGTAAATAATTGTAAATTTGAATATAATAGAAGACAAGGTATATCTATTACAGGAGCTGTTGATGTATTTGTTAACAATTGTTATTTCTTTAATACTGGTAAAATAAATGGAACAAGTCCAAAAGCTGGATTAGATATAGAACCAAGTGGATTATATAATAGTAATGTTACAATAAGTAATTGTATAGCAGATTCAAATGTATCTACTGGATTTTTGGTTTATGGGGATAATAGAAATATTGTAATTGATAATTGTGCATCTAAAAACCAATTAATATCTATAACTATAGCCCAAAGAAGTGCAACAACTGACAATGATGATGTATTTATAAGGCATGGAAATATAGGAGGTTCTCTACAAATCACAAGAGGTAATATAAGGGTAGAGGACTGTGAAGTAGATTCAGTTTATTTTACTGCTGATACATCAGGGATAGGAGCAAATGTAACTATTAGTAATTCAGTGATAGGAGCAAAAAGATGGGAAGGAAGTACATATTTCAATTCAGTTTTTTTAATTGATTCTAATAGCCAAATTAACAACTTATATATATTTGATTCCAAAATAGATTACGACCCATCAATTCTTACTCAAGGATTGTTCAATATAGGTGGGAATTCTATAAGAGATAATATCCTATTTGAAAATTGTGATATTTCACAGAAAAATACAGTAAATTCTCTAAATACAAAAGTAGGCTCTTATAGAAATTGTAGATTCTATAATATGACAAGAATATATTTGGCTAATGAACCAAATAAAACAGTTGAGTTTACAGATAATTACTGTGCCATGACAAGAGAAAGTTCAAGTACCAACATATTTAGTTTTCTAAATTCAAGTAGTACTCAAGATGTTATACTCTTTGTTGTAAGAAATAACACCTTTAGTACTAAGGGGTCTATAAATGTTGGAAGTATAGGACTTATAGATGTTACTGGAGTTAATCTTGGTAATAAAATGATATTTGAGAATAATCATTTCTTAACTCAATATCCTCTTACACAAGAGCAGATAATAAAAGCCCTAAGCAATAGGATAACAGTTGATACCAATTATAATTTTACCTCCAGATTTCCTTATAGAGCTACTTTAGAATCTTTACCTGCTTATAATACTTTTGATGCAGGGGCTTTAATATATGGGGATGATAATTTGTTATACTTTTGGAATGGTACAAATTTAACTAATTCAGAAGGTACAGATGCCAGAAAGGTAGTAATAGTCTAA

Genome Context

Genome Context

Tertiary structure

1 / 4
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
PhiCrAss001, a member of the most abundant bacteriophage family in the human gut, infects Bacteroides Shkoporov,A.N., Khokhlova,E.V., Fitzgerald,C.B., Stockdale,S.R., Draper,L.A., Ross,R.P. and Hill,C. 2018-06-26 — GenBank