Protein

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Genbank accession
APU89257.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MRKIILFLVLLIFSACSSPQVAAPLASPVNEIVVSNATQLASAMSTAINGTTITMRGGTYTAPASGWQFANGGVTLRNFPGEQVILNQARMNVSGNYIIKCLQSSLAVDGNKIIGSDVNGQKGIVMQGVTGAIAPAILAYKCDGWEIAGVEFRNVGYAIFTRKVDNGDTSADRWYVHDNFVSDYYRESGMQFNGNSNRIENNVILKATSQYTSTFGCQVLNLLGNNNIVRGNHLERVNQSVRCIGIFFEWDLADANLIENNTIAGVVNGVSFFGGDNNVIRNNTLTGTDTAFILRSWADGTTAYPCNFSAFMPLESDTSNPDWGYMYPHDCRSKGNRFEGNAVSGFRTFSQVNLPEASNIFVNATSTHTPTATQTNTPIVIPPTATPVPAETRMLIPLYTSPTNWGQVISANVGQVIDVIINPNNGVGASRQTAYANGIASLQGNGINVFGYVATGYGARNINAVKSEIDIWQTWYVPDGIFLDEVWNTDDPVRVGYYSELYSYIQAKGLKVILNPGAMTTETYLSIADAVCIFENSPAPVPYPAWAQPAKMCALMFNANREQMISFVAETKGRFGYIYATSDTLGNPWDVLPGYLIEAAALIAGLPVPVTSTAPPTTTPTSTRTPTATPTRTPTVTLTPTPDCRPLYWGDQYEGIWCK
Physico‐chemical
properties
protein length:659 AA
molecular weight: 71381,68940 Da
isoelectric point:5,16134
aromaticity:0,10167
hydropathy:-0,05524

Domains

Domains [InterPro]
PS51257
STR
1–16
PS51257 IPR012334 IPR021986
IPR011050
STR
12–402
IPR011050
IPR011050
STR
12–415
IPR011050
IPR006626
Unmapped
108–128
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR021986
APU89257.1
1 659
Architecture
STR
RBD
STR 1-415 | RBD 416-598 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU89257.1
1 659
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9603
Central domain 35 400 367 0,9495
C-terminal 401 659 258 0,0408
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-400
C-terminal
401-659

Taxonomy

  Name Taxonomy ID Lineage
Phage Virus Rctr41k
[NCBI] 		1924549 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU89257.1 [NCBI]
Genbank nucleotide accession
KX853513.1 [NCBI]
CDS location
range 35691 -> 37670
strand +
CDS
ATGAGAAAAATAATTCTATTTTTGGTACTATTAATTTTTTCTGCTTGCTCATCTCCGCAGGTCGCGGCTCCGCTTGCCTCTCCGGTAAATGAAATTGTGGTGAGCAACGCCACTCAGTTGGCGTCTGCGATGAGTACAGCCATAAATGGCACAACCATCACCATGCGCGGCGGAACGTACACCGCGCCCGCTTCGGGCTGGCAGTTTGCCAATGGTGGGGTGACGTTGCGTAACTTTCCAGGTGAGCAAGTAATACTTAATCAGGCTCGCATGAATGTGTCTGGCAACTACATCATCAAATGCCTGCAATCCTCCCTCGCCGTTGATGGAAACAAAATCATCGGTTCGGATGTCAACGGACAAAAGGGGATTGTCATGCAAGGCGTGACAGGAGCGATTGCCCCGGCAATCCTGGCGTACAAATGCGATGGGTGGGAAATCGCAGGCGTTGAGTTTAGGAATGTGGGATATGCTATATTCACGCGCAAAGTTGACAACGGGGACACGTCTGCCGACCGTTGGTACGTTCACGACAATTTTGTTTCAGATTACTACCGTGAAAGCGGGATGCAGTTCAACGGAAACAGCAACCGTATCGAGAATAATGTCATCCTGAAAGCAACGTCCCAATATACTTCCACATTCGGATGTCAGGTGCTAAACCTACTCGGCAACAATAACATAGTTCGCGGCAATCATTTAGAGCGCGTCAATCAGTCTGTGCGATGTATCGGCATCTTTTTCGAGTGGGATCTGGCGGATGCTAACCTCATCGAGAACAATACGATTGCCGGGGTGGTAAACGGCGTATCGTTCTTCGGCGGTGACAACAATGTCATCCGAAACAATACACTGACCGGGACAGACACGGCATTTATCCTCCGTTCTTGGGCGGATGGTACGACCGCCTATCCATGTAACTTCTCAGCGTTCATGCCCCTAGAGAGCGATACGTCCAATCCTGATTGGGGGTATATGTATCCCCATGACTGCCGTTCGAAAGGCAACCGGTTCGAAGGTAATGCGGTGAGTGGGTTCAGGACATTCTCACAGGTGAACCTGCCGGAAGCATCGAACATTTTTGTGAATGCAACTTCGACCCATACACCTACGGCGACACAGACGAACACACCGATTGTAATTCCGCCAACCGCAACCCCTGTGCCAGCGGAAACCCGCATGTTGATACCTCTCTACACCTCCCCGACGAATTGGGGACAGGTCATATCCGCTAATGTGGGGCAGGTGATTGATGTAATTATCAATCCGAATAATGGCGTGGGAGCGTCAAGGCAAACCGCATACGCCAATGGCATCGCCTCATTGCAGGGCAACGGCATCAACGTTTTTGGCTATGTGGCAACTGGGTACGGCGCGAGGAATATCAATGCTGTCAAATCGGAAATTGACATATGGCAAACGTGGTACGTTCCAGACGGAATATTTCTCGATGAGGTCTGGAATACAGACGATCCAGTGAGGGTTGGATACTATTCGGAACTTTATTCCTACATCCAAGCAAAGGGACTGAAAGTCATTCTAAATCCCGGAGCGATGACGACTGAAACCTATTTGAGCATTGCCGATGCTGTTTGTATCTTCGAAAACTCCCCCGCTCCCGTTCCTTATCCGGCATGGGCGCAACCCGCGAAAATGTGCGCTTTGATGTTCAATGCCAACCGCGAACAAATGATTTCATTTGTTGCGGAGACAAAAGGACGGTTCGGTTACATCTACGCAACGAGTGACACGCTCGGAAATCCCTGGGATGTTTTGCCGGGCTATCTTATCGAAGCCGCCGCGCTGATTGCGGGTTTGCCTGTGCCTGTAACTTCAACCGCACCCCCTACGACGACGCCAACATCAACGCGAACCCCCACCGCGACACCAACAAGAACACCGACAGTCACCTTGACACCAACGCCGGACTGCCGTCCGTTGTATTGGGGCGATCAATACGAGGGGATATGGTGCAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
825a96df0a0ea76f8fbbe31bffc3a637d7d18f1bd9e7bcf1802c5d53ca285eed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50