Protein

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Genbank accession
AXC36804.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSINRIRGDGGVIIDSKSFLELPKAPSKETADVIRSGMIRYNKEWKSFEGVLDFEDGSMAYRRFANLDANGKLLTSQLPDSVTSGLQFVGTYNPIPDDIDPPLAQTPLPAPAASLNGDYYVVRGIMDAAQAHYEANNPQTSPVTFTPTNPTGQGNWIEILYYVDSNPNISGAKLVTYAFARIITASIPSTGHDGLENLATDTDLTKPFASGVPMNQTALSDGDWIIITEDKNIRLRQSRTSISAASVLYDNTVMIANHRQFRTNAGTVQTSIDNVVIECLRRTGDSMYNDGTDGSGRFGVVYGSAAAPALTFNNNPFDPTNNPGNDPAKWSDANTGIFHPADDAIGFSTAGTERVRINNSTLTLYQSTSTPASTPVLRFDNATNTNVGLSASSNIISFSSMNKVQVEFKNGESAFHGNIVVDGTSTLTGDTSASNITASGNLNIQGNTTLGDAASDTITVNGVSTFTANTNFNGTTNKFKNINLLANGIITLESTTNQSTIQLVSSDLKLSMGNYADVSIYDNGTIRTRFNRYGIQLPVLATIDNSVGVDGMIAYSNTERTSMQKVQGQWVPIGSGSVRTDAFTISSWVLSGNYYTLTVTASNIVTAEIQEQVSPGVYTRVEVDSVTFNGTNVVFSIPSTPDVRFDGRTLVTIR
Physico‐chemical
properties
protein length:654 AA
molecular weight: 70165,87800 Da
isoelectric point:4,79053
aromaticity:0,07951
hydropathy:-0,23899

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC36804.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,8797
Central domain 179 377 200 0,4332
C-terminal 378 654 276 0,8439
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-377
C-terminal
378-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UB
[NCBI] 		2268588 Uroviricota > Caudoviricetes > Asteriusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC36804.1 [NCBI]
Genbank nucleotide accession
MH383160 [NCBI]
CDS location
range 64562 -> 66526
strand +
CDS
ATGAGTATAAATCGAATTAGAGGTGATGGTGGTGTAATTATTGATAGTAAATCTTTTTTAGAGTTACCGAAAGCACCATCAAAAGAAACCGCTGATGTAATAAGATCAGGGATGATTAGATACAATAAAGAATGGAAATCATTTGAAGGTGTTCTGGATTTTGAAGATGGTAGTATGGCATATCGACGTTTTGCAAACCTAGATGCAAACGGTAAACTTCTTACTTCCCAATTACCAGATTCAGTAACTAGTGGTTTACAATTTGTTGGTACATATAATCCCATCCCAGATGATATTGATCCACCTTTAGCACAAACTCCACTACCAGCACCAGCAGCATCACTAAATGGTGATTATTATGTTGTTCGTGGTATTATGGATGCCGCACAAGCCCATTATGAAGCAAATAATCCACAAACAAGTCCTGTTACATTTACACCTACAAATCCAACTGGACAAGGTAATTGGATTGAAATTTTATATTATGTTGACTCTAATCCAAATATATCTGGTGCTAAACTAGTAACATACGCTTTTGCTAGAATTATTACTGCATCTATTCCTAGTACTGGACATGATGGCCTTGAAAATTTAGCAACAGATACTGACTTGACCAAACCATTCGCATCTGGTGTTCCAATGAACCAAACTGCACTTTCAGATGGCGATTGGATTATTATAACTGAAGATAAGAATATACGTCTTCGTCAGTCAAGAACAAGCATTTCCGCTGCTTCAGTATTATATGACAATACTGTAATGATTGCAAATCATCGTCAATTTAGGACAAACGCAGGGACCGTACAAACATCCATAGATAACGTTGTGATTGAGTGTTTACGTAGAACTGGTGATTCTATGTATAATGATGGAACAGACGGCTCTGGACGTTTTGGGGTGGTGTATGGAAGTGCAGCAGCACCAGCATTGACATTTAATAATAATCCGTTTGACCCAACGAATAACCCAGGTAATGACCCAGCTAAGTGGTCCGATGCTAATACTGGTATATTTCATCCAGCCGATGACGCAATTGGGTTCAGTACTGCTGGTACAGAACGTGTTCGAATTAATAATTCAACACTAACATTATATCAATCAACATCAACACCTGCATCAACACCAGTGCTAAGATTTGATAATGCAACTAATACTAATGTGGGATTAAGTGCTAGTAGTAATATTATTTCATTTAGTTCAATGAATAAAGTTCAAGTTGAATTTAAAAATGGCGAAAGTGCGTTTCATGGTAATATTGTTGTTGATGGTACAAGTACATTAACTGGGGATACATCAGCTAGTAATATAACTGCTAGTGGTAATTTAAACATTCAAGGTAATACCACATTAGGTGATGCTGCATCAGATACCATTACAGTTAATGGTGTTAGTACTTTTACAGCTAATACTAATTTTAATGGAACAACTAATAAATTTAAAAATATAAATCTATTAGCTAATGGTATAATTACATTAGAAAGTACTACTAATCAAAGTACAATCCAATTAGTTAGTTCTGATTTAAAACTATCAATGGGTAATTATGCTGATGTAAGTATCTATGATAATGGAACTATAAGAACACGTTTTAATAGATATGGTATCCAATTACCAGTACTAGCTACTATTGATAACTCTGTTGGCGTTGATGGTATGATTGCATACTCCAATACCGAGCGTACTTCAATGCAAAAAGTTCAAGGTCAATGGGTTCCAATTGGTTCAGGTTCAGTGAGAACCGATGCTTTTACCATTTCATCTTGGGTATTAAGTGGTAACTACTACACCCTTACTGTAACAGCCTCAAACATCGTCACAGCAGAGATACAGGAACAGGTTAGTCCTGGTGTCTATACTCGTGTTGAGGTCGATAGCGTGACGTTTAACGGCACTAACGTAGTGTTCAGTATACCTTCAACACCTGATGTACGTTTCGACGGAAGAACATTGGTAACAATTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e9d29dee98945a7f1f1fd96d85ab6e85b81b848070e5264cd5d75d83bd303c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization Of A New Bacterial Virus From Orangutan (Pongo pygmaeus) Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2008-12 — GenBank
Genome Assembly Of Bacteriophage Specific To Escherichia coli 0157:H7 Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2019-07 — GenBank