Protein

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Genbank accession
YP_010357308.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALTNLGKTGLNLREQDLLDRILVGSTDPSGVVSSNIGDLYLVPSIPDLFINMDGITTWKNISSLVELEVDDSAYNTLQKIVDKLKASELAISEIQVSDIADLQDYLDNLSVSDIQNLQPALDGKVDKVAGKGLSTNDFTIAYRNDVDSNTSHRARTDNPHGVSKSQVGLGNVNNTSDLSKPISTLQQVAFDTKVDKVTGKELSDNNYTDEDKSTVINASSHMDSENNPHGVTDTQLGLGTGHYREPLSTTTELSALPQDDLVEGERRYVAADNSDYFYFPDVLTGDLAPDDQTGGLGFWVKSSADADLSGYVSKTESETISGAKVFTAEHTIFQGSSVDRYVRFAESVGQFNGAFLQYEGSTNKFHIGVHIPETSDTADDTKVITIQRSNGYIGINKTSPTTEFDLVGSAAISGNLTVVDEAYSESSWNSNLQVPTKNAIRDYFVANKSFYTSNGTLTGTRTIAMDGNQIIFSNDGGATNPEKIIYFNSGRIGVGGINPWSSSSQITNEPAYPLQTPGVATYGLTFKPNGTVQSDGISPVVFFASLVSGGASDGYVMTTKNFKDDVTVWNIESVGNSIYDDSGRQTESTVGLRNDFTGGEYRVFDLFNNDYGGVSSVAEAQGFVAIHGGGATPKKVGLWRYDGTTYSPMWVLDGSNVFTFSIGVNVPDEVYSGSWDGSTEVPTKNAIFDLIDNFSPSVDIADINATGTASASTYLRGDGVWATVTASAAWGAISGTLTDQTDLVAKFGEYLPLSGGTVTGNLFAPSFRVQGTGTGISNTGVLAVYESDGTTRQGYIGFGSGSSSDFIWYNDVGSNYLRLLDDGGVNGLAYNYSGGTGVVYHTGNSGGLVNTGSTSQTKTGGLAAQTLTTTNSGDGATLLTFNFERPWRFSQEGTGSGAVLGLQDLNGSKSFNILDPSGNRNHSFSSSGNYDLTGDIEMSKEKPILTLHSTKNGNWEVGETLSEIIFYGADGSSNGANTRGAIKLSSLDVFGIRFNMDFYTGNNNDPELGLRIGYDKNITAYGTISAEGSISSSGDMTCSSIYASGVNSYSVVRQYINTSSAAHQRMDAREEGSQARMHWYGITTSGSTGAALHSFFNGSSYNAFTAATSGMVFDKSVTAPNFILSSDIRLKKNIKTLTGDELNLNWVDFDWKDTGESQLGLIAQEVEKINPRFVNTNEKGFKSVKYIDVFVAKMAEKDRKDRDKDAKIKSLETRVSKLEKFLNLN
Physico‐chemical
properties
protein length:1226 AA
molecular weight: 131490,73690 Da
isoelectric point:4,63166
aromaticity:0,09380
hydropathy:-0,34168

Domains

Domains [InterPro]
DC_1880
STR
26–584
DC_1880 IPR030392 DC_1419
DC_0487
STR
549–959
DC_0487 IPR030392
YP_010357308.1
1 1226
Architecture
STR
CHP
RBD
STR 26-959 | CHP 1127-1175 | RBD 1176-1226
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010357308.1
1 1226
Domain Start End Length (AA) Confidence
N-terminal 1 462 462 0,7763
Central domain 463 661 200 0,2435
C-terminal 662 1226 564 0,8147
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-462
Central
463-661
C-terminal
662-1226

Taxonomy

  Name Taxonomy ID Lineage
Phage Maribacter phage Colly_1
[NCBI] 		2745691 Uroviricota > Caudoviricetes > Molycolviridae > Mollyvirus colly >
Host Maribacter forsetii
[NCBI] 		444515 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010357308.1 [NCBI]
Genbank nucleotide accession
NC_062752 [NCBI]
CDS location
range 31944 -> 35624
strand +
CDS
ATGGCGTTAACAAATTTAGGTAAAACAGGTTTAAATTTAAGGGAGCAAGACTTACTAGATAGAATACTAGTAGGTTCGACCGACCCTAGTGGAGTTGTTTCTTCTAATATAGGGGACTTATATTTAGTACCTTCTATTCCTGACCTATTTATTAATATGGATGGAATAACAACTTGGAAGAATATTTCTTCTTTAGTTGAGTTAGAGGTTGATGACTCTGCCTATAATACATTACAAAAAATAGTAGATAAGTTAAAAGCTTCTGAATTAGCAATATCTGAGATACAAGTTTCAGACATAGCTGACTTACAGGACTACTTAGATAACTTGAGTGTGTCTGACATACAGAATTTACAACCTGCATTAGACGGCAAGGTAGATAAAGTAGCTGGGAAAGGTTTAAGTACTAATGACTTCACTATAGCTTATCGTAATGATGTGGACTCCAATACAAGTCATCGAGCTAGAACAGATAATCCTCACGGTGTTTCTAAGTCCCAAGTAGGACTAGGTAATGTGAATAACACTTCTGACCTTAGCAAACCTATTAGTACATTACAGCAAGTTGCTTTTGATACTAAGGTAGATAAAGTAACAGGTAAGGAATTGTCTGACAATAATTACACTGACGAAGATAAGTCTACTGTTATTAATGCGTCTTCCCATATGGACTCTGAAAATAACCCTCACGGTGTTACTGATACCCAATTAGGGTTAGGAACAGGGCATTATAGAGAACCCTTATCTACTACTACTGAACTATCGGCTTTACCTCAGGATGACCTAGTTGAAGGAGAACGGAGATATGTAGCTGCTGATAACAGCGACTACTTCTACTTCCCTGATGTCTTAACAGGAGACTTAGCCCCTGACGATCAAACTGGAGGTTTAGGTTTCTGGGTTAAGTCTAGTGCAGACGCTGACTTAAGTGGATATGTGAGTAAGACTGAGTCTGAAACTATATCAGGAGCTAAAGTATTTACAGCAGAACATACTATATTCCAAGGGAGTAGTGTTGACAGGTATGTAAGATTTGCAGAGTCTGTAGGTCAATTTAACGGGGCTTTTCTCCAATACGAAGGGAGTACTAATAAATTCCATATAGGAGTTCATATCCCTGAGACCTCCGATACAGCTGATGACACCAAAGTAATTACAATTCAGAGGAGTAATGGCTACATAGGAATAAATAAAACATCCCCAACTACTGAATTTGACTTAGTAGGGTCAGCCGCAATTAGTGGAAACCTTACTGTTGTTGATGAAGCTTACTCGGAATCCTCTTGGAATAGTAATTTGCAAGTTCCTACTAAAAATGCTATCCGAGACTATTTCGTTGCAAACAAAAGCTTTTACACTAGTAACGGGACTCTTACAGGTACTAGAACAATTGCCATGGACGGCAACCAAATTATTTTTAGTAATGATGGTGGAGCTACTAACCCTGAGAAAATAATATATTTCAATTCAGGTAGGATAGGAGTAGGAGGAATAAATCCGTGGTCAAGTAGTTCTCAAATTACTAATGAGCCAGCTTATCCACTTCAAACACCTGGGGTAGCCACTTATGGGTTGACCTTCAAACCAAACGGAACTGTTCAATCTGACGGTATAAGCCCAGTAGTTTTCTTTGCTAGTTTAGTTAGCGGAGGTGCTAGTGATGGTTACGTTATGACTACTAAGAATTTTAAAGACGACGTAACCGTTTGGAATATTGAATCAGTAGGGAACTCAATCTATGATGACTCTGGTCGTCAAACTGAATCTACTGTAGGACTTCGTAATGACTTCACCGGAGGTGAGTATAGAGTCTTCGATCTTTTCAATAATGATTATGGGGGAGTTAGTAGTGTTGCTGAAGCTCAAGGGTTTGTAGCTATACATGGAGGGGGTGCTACTCCTAAGAAAGTAGGTCTATGGAGATATGATGGAACTACTTATAGTCCTATGTGGGTTCTAGATGGTTCTAATGTTTTCACTTTTAGTATAGGAGTGAATGTTCCTGACGAAGTTTATAGTGGAAGTTGGGACGGGTCTACCGAGGTACCTACAAAGAATGCTATATTTGATTTAATAGATAATTTCTCACCTAGCGTAGATATAGCAGATATTAATGCAACAGGAACAGCCTCAGCTTCTACTTACTTAAGAGGAGATGGGGTGTGGGCTACTGTAACCGCTTCTGCTGCTTGGGGAGCTATCTCAGGTACTTTAACTGACCAAACGGACTTAGTCGCTAAATTCGGGGAATACTTACCATTATCAGGTGGTACAGTAACAGGTAATCTATTCGCACCCTCTTTTAGGGTACAAGGCACAGGCACTGGTATATCAAATACAGGAGTCCTAGCTGTCTATGAATCAGATGGTACAACTAGACAAGGTTATATAGGGTTTGGTAGTGGTTCAAGTTCAGATTTTATCTGGTATAATGACGTAGGTTCAAACTATTTAAGGCTGCTAGATGATGGTGGGGTAAATGGCTTAGCCTACAACTATTCGGGGGGAACTGGTGTTGTATACCATACAGGTAACAGTGGAGGTTTAGTGAATACTGGTTCAACATCTCAAACTAAAACTGGGGGATTAGCAGCACAGACATTAACAACTACAAACTCAGGGGATGGAGCAACTTTACTTACATTCAACTTCGAACGTCCTTGGAGATTCTCACAAGAGGGTACAGGCTCAGGGGCAGTACTAGGGTTACAAGATTTAAACGGGTCAAAGAGCTTTAACATACTAGACCCATCAGGAAATAGAAACCACTCTTTTTCATCATCAGGTAATTATGACCTAACTGGTGACATAGAAATGAGTAAAGAAAAGCCTATTTTGACTCTACATAGTACTAAGAATGGAAACTGGGAAGTAGGAGAGACCTTATCAGAAATTATCTTTTATGGAGCGGATGGTAGTAGTAACGGTGCAAATACTAGAGGGGCTATAAAATTAAGCTCGCTTGACGTATTTGGAATAAGGTTCAATATGGATTTCTACACAGGAAATAATAATGACCCTGAGCTAGGATTAAGAATAGGGTATGATAAGAATATAACAGCTTATGGAACTATATCTGCAGAGGGTTCTATAAGTTCTTCAGGAGACATGACTTGTAGTAGTATATACGCTAGTGGGGTTAATTCTTATTCAGTAGTTAGGCAGTATATAAACACTTCCTCAGCTGCTCACCAAAGAATGGATGCTAGAGAGGAGGGTTCTCAAGCTAGGATGCACTGGTACGGAATAACAACTTCTGGTTCTACAGGTGCAGCACTGCATTCCTTCTTCAACGGAAGTAGTTATAATGCATTCACTGCAGCAACTTCGGGGATGGTATTTGATAAATCAGTTACAGCACCTAACTTTATTCTATCATCCGACATACGTTTAAAGAAGAATATTAAAACTTTAACAGGTGACGAGTTAAACCTTAACTGGGTAGACTTTGATTGGAAAGATACAGGAGAGAGTCAATTAGGACTTATTGCACAAGAGGTAGAGAAAATAAACCCAAGATTCGTTAATACAAATGAAAAGGGATTTAAGTCAGTTAAGTATATAGATGTTTTTGTCGCTAAAATGGCAGAGAAGGATAGAAAAGATAGGGATAAGGACGCTAAGATAAAGTCTTTAGAAACTAGGGTATCTAAATTAGAGAAATTCTTAAATCTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
972b27ba61a2457cf704e3697ceafd511faf08edd204bac47e2542e214e50062
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank